A5A2G4_CHICK (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000001966 T37607_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.879
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000003047 RRM 5 73
ENSGALP00000003047 RRM 271 341
ENSGALP00000039322 RRM 50 118
ENSGALP00000039322 RRM 145 213
ENSGALP00000039322 RRM 413 435
ENSGALP00000039322 RRM 420 463

Links

Other RRM family RBPs
Other Gallus gallus RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
62054 Helobdella robusta 62054 I 0.786
90208 Helobdella robusta 90208 I 0.780
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.936
AAEL014033 Aedes aegypti AAEL014033 I 0.864
AGAP004950 Anopheles gambiae AGAP004950 I 0.871
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.857
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.700
bru-3 Drosophila melanogaster FBgn0262350 D 0.879
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.921
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.936
BRUNOL6 Homo sapiens ENSG00000140488 D 0.850
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.736
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.736
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.750
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.857
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.929
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.864
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.857
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.865
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.864
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.707
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.871
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.864
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.871
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.864
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.836
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.943
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.850
CELF6 Oryzias latipes ENSORLG00000013392 I 0.950
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.843
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.979
Celf6 Mus musculus ENSMUSG00000032297 I 0.857
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.943
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.914
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.815
CJA07020 Caenorhabditis japonica CJA07020 I 0.779
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.721
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.821
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.779
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.707
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.864
GD12651 Drosophila simulans FBgn0184378 I 0.879
GE20053 Drosophila yakuba FBgn0237378 I 0.879
GF10965 Drosophila ananassae FBgn0088005 I 0.879
GG13757 Drosophila erecta FBgn0106020 I 0.879
GH14684 Drosophila grimshawi FBgn0122160 I 0.886
GI13095 Drosophila mojavensis FBgn0135852 I 0.886
GJ13842 Drosophila virilis FBgn0201061 I 0.886
GK17101 Drosophila willistoni FBgn0219100 I 0.879
GL21647 Drosophila persimilis FBgn0159240 I 0.843
GM24582 Drosophila sechellia FBgn0179445 I 0.879
HEXA Macaca mulatta ENSMMUG00000010687 I 0.850
LOAG_05508 Loa loa LOAG_05508 I 0.793
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.736
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.850
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.850
PHUM315130 Pediculus humanus PHUM315130 I 0.900
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.736
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.771
Smp_041280 Schistosoma mansoni Smp_041280 I 0.836
Smp_131780 Schistosoma mansoni Smp_131780 I 0.786