Rbm39 (Mus musculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMUSG00000027620 T39284_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000029149 RRM 155 223
ENSMUSP00000029149 RRM 252 322
ENSMUSP00000029149 RRM 439 496
ENSMUSP00000105216 RRM 155 223
ENSMUSP00000105216 RRM 252 322
ENSMUSP00000105216 RRM 445 502
ENSMUSP00000116820 RRM 155 223
ENSMUSP00000116820 RRM 252 322
ENSMUSP00000116950 RRM 154 222
ENSMUSP00000116950 RRM 251 273
ENSMUSP00000117462 RRM 17 85
ENSMUSP00000117462 RRM 114 140
ENSMUSP00000117462 RRM 137 162
ENSMUSP00000119298 RRM 155 223
ENSMUSP00000119298 RRM 252 322
ENSMUSP00000119298 RRM 439 496

Links

Other RRM family RBPs
Other Mus musculus RBPs

102 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A5D7Q4_BOVIN Bos taurus ENSBTAG00000009663 I 0.000
AAA49715 Xenopus laevis AAA49715 I 0.000
AAH41191 Xenopus laevis AAH41191 I 0.000
AAH42217 Xenopus laevis AAH42217 I 0.000
AAI06324 Xenopus laevis AAI06324 I 0.000
AAI30161 Xenopus laevis AAI30161 I 0.000
Ame_R016025 Ailuropoda melanoleuca Ame_R016025 I 0.000
Ame_R016026 Ailuropoda melanoleuca Ame_R016026 N 0.000
Ame_R019252 Ailuropoda melanoleuca Ame_R019252 I 0.000
CAA42778 Xenopus laevis CAA42778 I 0.000
CSDA Taeniopygia guttata ENSTGUG00000012047 I 0.000
CSDA Gorilla gorilla ENSGGOG00000001352 I 0.000
CSDA Tursiops truncatus ENSTTRG00000008045 I 0.000
CSDA Loxodonta africana ENSLAFG00000017247 I 0.000
CSDA Oryctolagus cuniculus ENSOCUG00000001889 I 0.000
Csda Rattus norvegicus ENSRNOG00000005480 I 0.000
Csda Mus musculus ENSMUSG00000030189 I 0.000
CSDA Pteropus vampyrus ENSPVAG00000006740 I 0.000
CSDA Macaca mulatta ENSMMUG00000022469 I 0.000
CSDA Myotis lucifugus ENSMLUG00000007476 I 0.000
CSDA Sus scrofa ENSSSCG00000000633 I 0.000
CSDA Spermophilus tridecemlineatus ENSSTOG00000002108 I 0.000
CSDA Pan troglodytes ENSPTRG00000004681 I 0.000
CSDA Tupaia belangeri ENSTBEG00000012570 I 0.000
CSDA Homo sapiens ENSG00000060138 I 0.000
CSDA Cavia porcellus ENSCPOG00000011329 I 0.000
Csda Dipodomys ordii ENSDORG00000009103 I 0.000
CSDA Choloepus hoffmanni ENSCHOG00000011988 I 0.000
CSDA Erinaceus europaeus ENSEEUG00000010415 I 0.000
CSDA Echinops telfairi ENSETEG00000002557 I 0.000
CSDA Felis catus ENSFCAG00000018959 I 0.000
ENSCAFG00000002541 Canis familiaris ENSCAFG00000002541 I 0.000
ENSCJAG00000031891 Callithrix jacchus ENSCJAG00000031891 I 0.000
ENSCPOG00000010888 Cavia porcellus ENSCPOG00000010888 I 0.000
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.000
ENSEEUG00000005657 Erinaceus europaeus ENSEEUG00000005657 I 0.000
ENSETEG00000004125 Echinops telfairi ENSETEG00000004125 I 0.000
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.000
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.000
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.000
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.000
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.000
ENSOCUG00000021258 Oryctolagus cuniculus ENSOCUG00000021258 N 0.000
ENSOCUG00000022716 Oryctolagus cuniculus ENSOCUG00000022716 N 0.000
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 N 0.000
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 N 0.000
ENSPPYG00000004279 Pongo pygmaeus ENSPPYG00000004279 I 0.000
ENSRNOG00000006596 Rattus norvegicus ENSRNOG00000006596 I 0.000
ENSSARG00000007896 Sorex araneus ENSSARG00000007896 I 0.000
ENSSTOG00000000116 Spermophilus tridecemlineatus ENSSTOG00000000116 I 0.000
LOC100065107 Equus caballus ENSECAG00000013777 I 0.000
LOC100067336 Equus caballus ENSECAG00000023592 I 0.000
LOC100396927 Callithrix jacchus ENSCJAG00000021660 I 0.000
LOC100401646 Callithrix jacchus ENSCJAG00000003155 I 0.000
P21573 Xenopus laevis P21573 I 0.000
Q00436 Xenopus laevis Q00436 I 0.000
Q8AXS2_ORYLA Oryzias latipes ENSORLG00000004225 I 0.000
Q90WH2_FUGRU Takifugu rubripes ENSTRUG00000015333 I 0.000
Q9N1Q2_CANFA Canis familiaris ENSCAFG00000013401 I 0.000
XP_856029.1 Canis familiaris ENSCAFG00000010117 I 0.000
XR_021659.1 Pan troglodytes ENSPTRG00000000615 I 0.000
YB-1 Homo sapiens ENSG00000065978 D 0.000
YBOX1_BOVIN Bos taurus ENSBTAG00000017368 I 0.000
YBOX1_CHICK Gallus gallus ENSGALG00000004848 I 0.000
YBOX1_RABIT Oryctolagus cuniculus ENSOCUG00000028047 I 0.000
YBOX1_RAT Rattus norvegicus ENSRNOG00000030807 I 0.000
YBX1 Tursiops truncatus ENSTTRG00000001353 I 0.000
YBX1 Loxodonta africana ENSLAFG00000007597 I 0.000
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.000
ybx1 Xenopus tropicalis ENSXETG00000013436 I 0.000
Ybx1 Dipodomys ordii ENSDORG00000016627 N 0.000
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.000
YBX1 Felis catus ENSFCAG00000015376 N 0.000
ybx1 Danio rerio ENSDARG00000004757 I 0.000
YBX1 Gasterosteus aculeatus ENSGACG00000006447 I 0.000
YBX1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.000
YBX1 Macropus eugenii ENSMEUG00000009893 N 0.000
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.000
Ybx1 Mus musculus ENSMUSG00000028639 I 0.000
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.000
YBX1 Microcebus murinus ENSMICG00000014984 I 0.000
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.000
YBX1 Tupaia belangeri ENSTBEG00000015642 N 0.000
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.000
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.000
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.000
YBX2 Pteropus vampyrus ENSPVAG00000005050 N 0.000
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.000
YBX2 Oryctolagus cuniculus ENSOCUG00000015064 I 0.000
YBX2 Vicugna pacos ENSVPAG00000003104 I 0.000
YBX2 Microcebus murinus ENSMICG00000012453 I 0.000
ybx2 Xenopus tropicalis ENSXETG00000025267 N 0.000