poldip3 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000013412 T42889_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000029397 RRM 293 356

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29629.m001425 Ricinus communis 29629.m001425 N 0.000
AC186319.4_FG002 Zea mays AC186319.4_FG002 N 0.000
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.000
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.000
BRADI3G20700 Brachypodium distachyon BRADI3G20700 N 0.000
BRADI3G39090 Brachypodium distachyon BRADI3G39090 N 0.000
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.000
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.000
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.000
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.000
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.000
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.000
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.000
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.000
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.000
MDP0000191633 Malus x domestica MDP0000191633 N 0.000
MDP0000202850 Malus x domestica MDP0000202850 N 0.000
MDP0000220851 Malus x domestica MDP0000220851 N 0.000
MDP0000288646 Malus x domestica MDP0000288646 N 0.000
MDP0000908645 Malus x domestica MDP0000908645 N 0.000
mgf019396m Mimulus guttatus mgf019396m N 0.000
PDK_20s1371981g001 Phoenix dactylifera PDK_20s1371981g001 N 0.000
PK22392.1 Cannabis sativa PK22392.1 N 0.000
ppa006963m Prunus persica ppa006963m N 0.000
ppa007812m Prunus persica ppa007812m N 0.000
SB03G027920 Sorghum bicolor Sb03g027920 N 0.000
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.000