Glyma08g18810.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma08g18810.1 T52722_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma08g18810.1 RRM 113 180
Glyma08g18810.1 RRM 210 278

Links

Other RRM family RBPs
Other Glycine max RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29485.m000140 Ricinus communis 29485.m000140 N 0.774
29650.m000268 Ricinus communis 29650.m000268 N 0.883
30068.m002593 Ricinus communis 30068.m002593 N 0.810
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.759
BGIOSIBCE006292 Oryza indica BGIOSIBCE006292 N 0.766
BGIOSIBCE022210 Oryza indica BGIOSIBCE022210 N 0.737
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.796
BRADI1G39150 Brachypodium distachyon BRADI1G39150 N 0.745
BRADI2G06650 Brachypodium distachyon BRADI2G06650 N 0.781
BRADI3G09250 Brachypodium distachyon BRADI3G09250 N 0.737
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.774
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.898
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.774
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.774
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.774
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.774
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.774
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.774
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.774
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.810
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.891
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.781
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.788
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.825
Cucsa.071470 Cucumis sativus Cucsa.071470 N 0.761
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.781
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.803
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.803
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.774
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.766
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.766
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.759
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.985
GRMZM2G029058 Zea mays GRMZM2G029058 N 0.737
GRMZM2G051043 Zea mays GRMZM2G051043 N 0.774
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.781
GRMZM2G069816 Zea mays GRMZM2G069816 N 0.766
GRMZM2G118590 Zea mays GRMZM2G118590 N 0.730
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.788
GRMZM2G349794 Zea mays GRMZM2G349794 N 0.701
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.905
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.810
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.818
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.803
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.803
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.803
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.766
LOC_Os06g35030 Oryza sativa LOC_Os06g35030 N 0.752
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.796
MDP0000155814 Malus x domestica MDP0000155814 N 0.730
MDP0000233630 Malus x domestica MDP0000233630 N 0.781
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.774
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.745
mgf005336m Mimulus guttatus mgf005336m N 0.730
mgf012896m Mimulus guttatus mgf012896m N 0.796
mgf013366m Mimulus guttatus mgf013366m N 0.788
mgf014445m Mimulus guttatus mgf014445m N 0.752
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.759
PK04894.1 Cannabis sativa PK04894.1 N 0.803
PK12463.1 Cannabis sativa PK12463.1 N 0.803
PK28889.1 Cannabis sativa PK28889.1 N 0.883
ppa006808m Prunus persica ppa006808m N 0.796
ppa009298m Prunus persica ppa009298m N 0.905
SB03G002180 Sorghum bicolor Sb03g002180 N 0.774
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.752
SB07G001560 Sorghum bicolor Sb07g001560 N 0.788
SB10G021290 Sorghum bicolor Sb10g021290 N 0.745
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.752
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.825
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.781
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.796