Glyma20g34330.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma20g34330.1 T52964_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma20g34330.1 RRM 8 76
Glyma20g34330.1 RRM 114 183

Links

Other RRM family RBPs
Other Glycine max RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
30008.m000830 Ricinus communis 30008.m000830 N 0.813
AC198361.3_FG004 Zea mays AC198361.3_FG004 N 0.727
AT4G14300 Arabidopsis thaliana AT4G14300-TAIR-G N 0.723
B9GRF1_POPTR Populus trichocarpa POPTR_0002s26030 N 0.712
B9HKT4_POPTR Populus trichocarpa POPTR_0008s17030 N 0.755
B9HSS5_POPTR Populus trichocarpa POPTR_0010s07790 N 0.755
B9IBE6_POPTR Populus trichocarpa POPTR_0014s18470 N 0.712
cassava12598.valid.m1 Manihot esculenta cassava12598.valid.m1 N 0.748
cassava12599.valid.m1 Manihot esculenta cassava12599.valid.m1 N 0.748
cassava12600.valid.m1 Manihot esculenta cassava12600.valid.m1 N 0.748
cassava12601.valid.m1 Manihot esculenta cassava12601.valid.m1 N 0.748
cassava7388.valid.m1 Manihot esculenta cassava7388.valid.m1 N 0.820
Cucsa.037090 Cucumis sativus Cucsa.037090 N 0.712
Cucsa.383370 Cucumis sativus Cucsa.383370 N 0.813
Glyma10g33320.1 Glycine max Glyma10g33320.1 N 0.978
GRMZM2G167505 Zea mays GRMZM2G167505 N 0.741
GRMZM2G176918 Zea mays GRMZM2G176918 N 0.727
GSVIVG00027891001 Vitis vinifera GSVIVG00027891001 N 0.799
GSVIVG00028394001 Vitis vinifera GSVIVG00028394001 N 0.799
LOC_Os10g33230 Oryza sativa LOC_Os10g33230 N 0.727
MDP0000130865 Malus x domestica MDP0000130865 N 0.712
MDP0000173934 Malus x domestica MDP0000173934 N 0.835
MDP0000217366 Malus x domestica MDP0000217366 N 0.827
MDP0000286430 Malus x domestica MDP0000286430 N 0.705
MDP0000320861 Malus x domestica MDP0000320861 N 0.727
mgf023368m Mimulus guttatus mgf023368m N 0.709
PK00513.1 Cannabis sativa PK00513.1 N 0.835
ppa005309m Prunus persica ppa005309m N 0.849
ppa005979m Prunus persica ppa005979m N 0.741
Sb01g019610 Sorghum bicolor Sb01g019610 N 0.741
XM_002870277.1 Arabidopsis lyrata fgenesh2_kg.7__2913__AT4G14300.1 N 0.723