estExt_fgenesh3_kg.C_30291 (Neurospora discreta)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 estExt_fgenesh3_kg.C_30291 T61127_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.805
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh3_kg.C_30291 S1 13 88

Links

Other S1 family RBPs
Other Neurospora discreta RBPs

253 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29607.m000238 Ricinus communis 29607.m000238 I 0.776
AT2G40290 Arabidopsis thaliana AT2G40290-TAIR-G I 0.776
B9HHU6_POPTR Populus trichocarpa POPTR_0008s07250 I 0.776
B9HSK1_POPTR Populus trichocarpa POPTR_0010s19230 I 0.776
BGIOSIBCE010732 Oryza indica BGIOSIBCE010732 I 0.737
BRADI1G16700 Brachypodium distachyon BRADI1G16700 I 0.737
BRADI1G65210 Brachypodium distachyon BRADI1G65210 N 0.724
cassava16515.m1 Manihot esculenta cassava16515.m1 I 0.763
cassava7658.valid.m1 Manihot esculenta cassava7658.valid.m1 I 0.789
cassava7659.valid.m1 Manihot esculenta cassava7659.valid.m1 I 0.789
Cucsa.239320 Cucumis sativus Cucsa.239320 I 0.776
EIF2 Arabidopsis thaliana AT5G05470-TAIR-G I 0.737
estExt_fgenesh1_kg.C_70012 Micromonas pusilla estExt_fgenesh1_kg.C_70012 I 0.776
estExt_fgenesh1_pm.C_210071 Selaginella moellendorfii estExt_fgenesh1_pm.C_210071 I 0.789
estExt_fgenesh4_pg.C_220183 Volvox carteri estExt_fgenesh4_pg.C_220183 I 0.803
estExt_Genewise1.C_100332 Chlorella vulgaris estExt_Genewise1.C_100332 I 0.789
estExt_Genewise1.C_110295 Coccomyxa C 169 estExt_Genewise1.C_110295 I 0.789
estExt_gwp_gw1.C_3520018 Physcomitrella patens estExt_gwp_gw1.C_3520018 I 0.776
e_gwW.11.341.1 Chlamydomonas reinhardtii e_gwW.11.341.1 I 0.803
fgenesh1_pg.scaffold_55000187 Physcomitrella patens fgenesh1_pg.scaffold_55000187 I 0.803
Glyma11g35600.1 Glycine max Glyma11g35600.1 I 0.776
Glyma18g02820.1 Glycine max Glyma18g02820.1 I 0.776
GRMZM2G058138 Zea mays GRMZM2G058138 I 0.737
GRMZM2G083262 Zea mays GRMZM2G083262 I 0.737
GSVIVG00024676001 Vitis vinifera GSVIVG00024676001 I 0.776
IGS.gm_12_00191 Chlorella NC64A IGS.gm_12_00191 I 0.776
LjSGA_031492.1 Lotus japonicus LjSGA_031492.1 I 0.776
LOC_Os03g18510 Oryza sativa LOC_Os03g18510 I 0.737
MDP0000155133 Malus x domestica MDP0000155133 I 0.750
MDP0000663428 Malus x domestica MDP0000663428 I 0.776
MDP0000951954 Malus x domestica MDP0000951954 N 0.000
Medtr3g094720 Medicago truncatula Medtr3g094720 I 0.776
Medtr3g094730 Medicago truncatula Medtr3g094730 I 0.776
Medtr3g094740 Medicago truncatula Medtr3g094740 I 0.776
mgf006782m Mimulus guttatus mgf006782m I 0.763
PK10564.1 Cannabis sativa PK10564.1 I 0.776
ppa008120m Prunus persica ppa008120m I 0.776
SB01G038230 Sorghum bicolor Sb01g038230 I 0.737
XM_002873169.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_6000426 N 0.724
XM_002881666.1 Arabidopsis lyrata fgenesh2_kg.4__2141__AT2G40290.1 I 0.776