BGIOSIBCE013438 (Oryza indica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 BGIOSIBCE013438 T18130_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE013438 KH 108 177

Links

Other KH family RBPs
Other Oryza indica RBPs

49 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.753
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.756
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.756
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.743
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.720
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.800
PK22673.1 Cannabis sativa PK22673.1 N 0.757
PK23097.1 Cannabis sativa PK23097.1 N 0.778
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.757
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.733
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.778
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.703
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.757
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.747
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.703
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.760
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.763
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.747
MDP0000077753 Malus x domestica MDP0000077753 N 0.704
MDP0000186494 Malus x domestica MDP0000186494 N 0.767
MDP0000501473 Malus x domestica MDP0000501473 N 0.792
MDP0000665847 Malus x domestica MDP0000665847 N 0.767
MDP0000268130 Malus x domestica MDP0000268130 N 0.704
MDP0000119110 Malus x domestica MDP0000119110 N 0.792
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.761
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.792
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.792
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.781
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.792
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.792
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.737
mgf011994m Mimulus guttatus mgf011994m N 0.767
mgf005196m Mimulus guttatus mgf005196m N 0.760
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.707
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.972
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.707
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.808
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.773
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.789
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.746
ppa009701m Prunus persica ppa009701m N 0.747
27955.m000377 Ricinus communis 27955.m000377 N 0.784
29945.m000086 Ricinus communis 29945.m000086 N 0.817
SB01G003680 Sorghum bicolor Sb01g003680 N 0.945
SB02G006770 Sorghum bicolor Sb02g006770 N 0.808
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.819
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.822
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.932
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.808