FUBP3 (Loxodonta africana)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSLAFG00000011611 T18930_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000009704 KH 79 141
ENSLAFP00000009704 KH 164 227
ENSLAFP00000009704 KH 254 316
ENSLAFP00000009704 KH 355 420
ENSLAFP00000026694 KH 51 113
ENSLAFP00000026694 KH 136 199
ENSLAFP00000026694 KH 226 288
ENSLAFP00000026694 KH 327 392

Links

Other KH family RBPs
Other Loxodonta africana RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.988
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.788
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.787
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.969
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.791
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.977
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.791
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.984
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.791
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.791
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.965
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.791
fubp1 Danio rerio ENSDARG00000029248 I 0.760
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.848
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.969
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.791
FUBP1 Equus caballus ENSECAG00000010867 I 0.791
LOC100069755 Equus caballus ENSECAG00000011500 N 0.946
FUBP3 Felis catus ENSFCAG00000005113 N 0.977
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.788
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.938
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.809
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.754
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.973
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.795
FUBP1 Homo sapiens ENSG00000162613 I 0.795
FUBP3 Homo sapiens ENSG00000107164 N 0.973
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.791
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.973
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.795
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.938
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.791
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.992
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.957
Fubp3 Mus musculus ENSMUSG00000026843 N 0.973
Fubp1 Mus musculus ENSMUSG00000028034 I 0.787
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.791
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.914
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.977
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.726
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.791
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.949
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.757
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.760
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.813
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.833
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.791
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.844
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.973
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.795
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.795
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.973
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.791
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.965
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.981
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.977
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.787
FUBP3 Spermophilus tridecemlineatus ENSSTOG00000014105 N 0.700
FUBP3 Sus scrofa ENSSSCG00000005702 N 0.864
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.791
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.791
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.938
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.773
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.756
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.821
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.809
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.791
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.829
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.817
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.791
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.791
AAI69815 Xenopus laevis AAI69815 I 0.760
AAH70981 Xenopus laevis AAH70981 I 0.760
AAH60400 Xenopus laevis AAH60400 N 0.914
AAH44277 Xenopus laevis AAH44277 I 0.752
AAN77161 Xenopus laevis AAN77161 I 0.744
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.767
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.926