Dazap1 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000031387 T41212_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
DAZAP1
M013_0.6 		Homo sapiens UAGKWWR RNAcompete
Ray et al.(2013)
RNCMPT00013 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000046032 RRM 12 81
ENSRNOP00000046032 RRM 115 184

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.000
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.000
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.000
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.000
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.000
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.000
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.000
BC1G_12211 Botrytis cinerea BC1G_12211 N 0.000
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.000
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.000
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.000
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.000
PNO1 Canis familiaris ENSCAFG00000003256 N 0.000
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.000
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.000
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.000
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.000
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.000
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.000
CIMG_07268 Coccidioides immitis CIMG_07268 N 0.000
CPSG_08784 Coccidioides posadasii CPSG_08784 N 0.000
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.000
e_gw1.3.2749.1 Cryphonectria parasitica e_gw1.3.2749.1 N 0.000
pno1 Danio rerio ENSDARG00000008502 N 0.000
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.000
fgenesh_newKGs_pm.139__21 Emiliania huxleyi fgenesh_newKGs_pm.139__21 N 0.000
LOC100061904 Equus caballus ENSECAG00000011263 N 0.000
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.000
FGSG_01345 Fusarium graminearum FGSG_01345 N 0.000
FOXG_00036 Fusarium oxysporum FOXG_00036 N 0.000
FVEG_01480 Fusarium verticillioides FVEG_01480 N 0.000
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.000
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.000
GLP15_4616 Giardia lamblia GLP15_4616 N 0.000
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.000
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.000
Glyma08g44800.1 Glycine max Glyma08g44800.1 N 0.000
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.000
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.000
PNO1 Homo sapiens ENSG00000115946 N 0.000
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.000
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.000
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.000
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.000
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.000
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.000
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.000
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.000
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.000
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.000
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.000
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.000
PNO1 Microcebus murinus ENSMICG00000010897 N 0.000
e_gw1.4.614.1 Micromonas pusilla e_gw1.4.614.1 N 0.000
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.000
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.000
Pno1 Mus musculus ENSMUSG00000020116 N 0.000
e_gw1.3.1059.1 Mycosphaerella fijiensis e_gw1.3.1059.1 N 0.000
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.000
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 N 0.000
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.000
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.000
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.000
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.000
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.000
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.000
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.000
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.000
0700010277 Ostreococcus tauri 0700010277 N 0.000
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.000
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.000
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.000
Pc14g01220 Penicillium chrysogenum Pc14g01220 N 0.000
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.000
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.000
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.000
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.000
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.000
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.000
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.000
PNO1 Procavia capensis ENSPCAG00000016146 N 0.000
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.000
PTTG_01898 Puccinia triticina PTTG_01898 N 0.000
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.000
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.000
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.000
28525.m000262 Ricinus communis 28525.m000262 N 0.000
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.000
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.000
SPOG_00402 Schizosaccharomyces cryophilus SPOG_00402 N 0.000
SJAG_03872 Schizosaccharomyces japonicus SJAG_03872 N 0.000
SOCG_04140 Schizosaccharomyces octosporus SOCG_04140 N 0.000
rbp28 Schizosaccharomyces pombe SPAC2C4.11c N 0.000
SS1G_04290 Sclerotinia sclerotiorum SS1G_04290 N 0.000
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.000
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.000
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.000
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.000
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.000
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.000
PNO1 Sus scrofa ENSSSCG00000008352 N 0.000
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.000
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.000
3712.m00082 Tetrahymena thermophila 3712.m00082 N 0.000
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.000
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.000
fgenesh1_pm.C_scaffold_14000035 Trichoderma atroviride fgenesh1_pm.C_scaffold_14000035 N 0.000
estExt_fgenesh5_pg.C_40050 Trichoderma reesei estExt_fgenesh5_pg.C_40050 N 0.000
estExt_Genewise1Plus.C_91132 Trichoderma virens estExt_Genewise1Plus.C_91132 N 0.000
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.000
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.000
UM03495 Ustilago maydis UM03495 N 0.000
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.000
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.000
AAH42279 Xenopus laevis AAH42279 N 0.000
AAQ24169 Xenopus laevis AAQ24169 N 0.000
Q8AVH4 Xenopus laevis Q8AVH4 N 0.000
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.000
YALI0E01122g Yarrowia lipolytica YALI0E01122g N 0.000