Medtr3g106660 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr3g106660 T54478_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr3g106660.1 RRM 20 88
Medtr3g106660.1 RRM 108 178

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.764
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.750
PK22392.1 Cannabis sativa PK22392.1 N 0.707
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.729
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.879
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.850
MDP0000202850 Malus x domestica MDP0000202850 N 0.757
MDP0000191633 Malus x domestica MDP0000191633 N 0.736
MDP0000908645 Malus x domestica MDP0000908645 N 0.771
MDP0000220851 Malus x domestica MDP0000220851 N 0.736
MDP0000288646 Malus x domestica MDP0000288646 N 0.771
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.729
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.736
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.721
mgf019396m Mimulus guttatus mgf019396m N 0.814
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.721
ppa006963m Prunus persica ppa006963m N 0.743
ppa007812m Prunus persica ppa007812m N 0.814
29629.m001425 Ricinus communis 29629.m001425 N 0.736
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.721
GSVIVG00030120001 Vitis vinifera GSVIVG00030120001 N 0.771
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.721