AAI08588 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAI08588 T59611_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAI08588 RRM 131 201
AAI08588 RRM 267 336
AAI08588 RRM 598 666

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R017061 Ailuropoda melanoleuca Ame_R017061 N 0.735
Ame_R005511 Ailuropoda melanoleuca Ame_R005511 N 0.905
MYEF2 Anolis carolinensis ENSACAG00000004806 N 0.914
A6QQP0_BOVIN Bos taurus ENSBTAG00000008771 N 0.905
Q3SYX2_BOVIN Bos taurus ENSBTAG00000021039 N 0.735
MYEF2 Callithrix jacchus ENSCJAG00000001875 N 0.900
HNRNPM Callithrix jacchus ENSCJAG00000010802 N 0.739
MYEF2 Canis familiaris ENSCAFG00000014008 N 0.905
HNRNPM Canis familiaris ENSCAFG00000018524 N 0.735
HNRNPM Cavia porcellus ENSCPOG00000015182 N 0.730
MYEF2 Cavia porcellus ENSCPOG00000010584 N 0.858
HNRNPM Choloepus hoffmanni ENSCHOG00000013627 N 0.735
myef2 Danio rerio ENSDARG00000059398 N 0.848
ENSDORG00000015835 Dipodomys ordii ENSDORG00000015835 N 0.900
HNRNPM Echinops telfairi ENSETEG00000019712 N 0.735
LOC100070256 Equus caballus ENSECAG00000005741 N 0.905
HNRNPM Equus caballus ENSECAG00000023868 N 0.735
Q5ZHY2_CHICK Gallus gallus ENSGALG00000004905 N 0.905
Q5ZL80_CHICK Gallus gallus ENSGALG00000000377 N 0.722
MYEF2 Gasterosteus aculeatus ENSGACG00000016759 N 0.848
HNRNPM Gasterosteus aculeatus ENSGACG00000010265 N 0.748
HNRNPM Gorilla gorilla ENSGGOG00000003498 N 0.735
MYEF2 Gorilla gorilla ENSGGOG00000014968 N 0.900
HNRNPM Homo sapiens ENSG00000099783 N 0.735
MYEF2 Homo sapiens ENSG00000104177 N 0.905
MYEF2 Loxodonta africana ENSLAFG00000012990 N 0.900
HNRNPM Loxodonta africana ENSLAFG00000013603 N 0.735
MYEF2 Macaca mulatta ENSMMUG00000018834 N 0.905
HNRNPM Macaca mulatta ENSMMUG00000018806 N 0.735
MYEF2 Meleagris gallopavo ENSMGAG00000006915 N 0.905
HNRNPM Meleagris gallopavo ENSMGAG00000000700 N 0.712
HNRNPM Microcebus murinus ENSMICG00000002532 N 0.716
MYEF2 Monodelphis domestica ENSMODG00000002744 N 0.824
XM_001365870.1 Monodelphis domestica ENSMODG00000003801 N 0.735
Hnrnpm Mus musculus ENSMUSG00000059208 N 0.730
Gm9833 Mus musculus ENSMUSG00000049230 N 0.724
Myef2 Mus musculus ENSMUSG00000027201 N 0.895
HNRNPM Myotis lucifugus ENSMLUG00000006696 N 0.730
MYEF2 Myotis lucifugus ENSMLUG00000006781 N 0.710
MYEF2 Ochotona princeps ENSOPRG00000003919 N 0.790
ENSOCUG00000024611 Oryctolagus cuniculus ENSOCUG00000024611 N 0.735
ENSOCUG00000000552 Oryctolagus cuniculus ENSOCUG00000000552 N 0.735
MYEF2 Oryctolagus cuniculus ENSOCUG00000013043 N 0.905
MYEF2 Oryzias latipes ENSORLG00000002730 N 0.862
HNRNPM Oryzias latipes ENSORLG00000005400 N 0.743
MYEF2 Otolemur garnettii ENSOGAG00000010907 N 0.810
HNRNPM Pan troglodytes ENSPTRG00000010424 N 0.735
MYEF2 Pan troglodytes ENSPTRG00000007042 N 0.905
ENSPPYG00000009506 Pongo pygmaeus ENSPPYG00000009506 N 0.735
ENSPPYG00000006452 Pongo pygmaeus ENSPPYG00000006452 N 0.905
HNRNPM Procavia capensis ENSPCAG00000009678 N 0.720
MYEF2 Procavia capensis ENSPCAG00000016660 N 0.905
MYEF2 Pteropus vampyrus ENSPVAG00000004102 N 0.710
Myef2 Rattus norvegicus ENSRNOG00000005258 N 0.900
Hnrpm Rattus norvegicus ENSRNOG00000007921 N 0.735
HNRNPM Sorex araneus ENSSARG00000000267 N 0.703
MYEF2 Sorex araneus ENSSARG00000003264 N 0.790
MYEF2 Spermophilus tridecemlineatus ENSSTOG00000007740 N 0.705
MYEF2 Sus scrofa ENSSSCG00000004661 N 0.900
HNRNPM Sus scrofa ENSSSCG00000013602 N 0.735
MYEF2 Taeniopygia guttata ENSTGUG00000007130 N 0.900
MYEF2 Takifugu rubripes ENSTRUG00000016967 N 0.850
HNRNPM Takifugu rubripes ENSTRUG00000013783 N 0.724
MYEF2 Tarsius syrichta ENSTSYG00000010575 N 0.838
HNRNPM Tetraodon nigroviridis ENSTNIG00000015530 N 0.719
MYEF2 Tetraodon nigroviridis ENSTNIG00000009526 N 0.848
HNRNPM Tupaia belangeri ENSTBEG00000008718 N 0.725
MYEF2 Tursiops truncatus ENSTTRG00000008076 N 0.905
HNRNPM Tursiops truncatus ENSTTRG00000009769 N 0.735
MYEF2 Vicugna pacos ENSVPAG00000004721 N 0.905
AAI34826 Xenopus laevis AAI34826 N 0.711
myef2 Xenopus tropicalis ENSXETG00000018412 N 0.976