IGF2BP3 (Takifugu rubripes)
KH,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1)
PF00076 (RRM_1) 		IPR018111
IPR000504 		ENSTRUG00000006094 T22276_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
IGF2BP3
M295_0.6 		Homo sapiens Sequence logo not available CAUU PAR-clip
Cook et al.(2011)
357_20371350 		0.802
IGF2BP3
M163_0.6 		Homo sapiens AMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00172 		0.802
IGF2BP1
M296_0.6 		Homo sapiens AAGCACCCGUU SELEX
Cook et al.(2011)
359_12507992 		0.768
IGF2BP1
M293_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
355_20371350 		0.768
IGF2BP2
M294_0.6 		Homo sapiens Sequence logo not available CAU PAR-clip
Cook et al.(2011)
356_20371350 		0.736
IGF2BP2
M032_0.6 		Homo sapiens VMAHWCA RNAcompete
Ray et al.(2013)
RNCMPT00033 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000014806 RRM 4 69
ENSTRUP00000014806 RRM 83 150
ENSTRUP00000014806 KH 196 259
ENSTRUP00000014806 KH 277 342
ENSTRUP00000014806 KH 409 472
ENSTRUP00000014806 KH 491 555

Links

Other KH,RRM family RBPs
Other Takifugu rubripes RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.980
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.936
igf2bp3 Danio rerio ENSDARG00000010266 I 0.855
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.835
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.835
AAH57700 Xenopus laevis AAH57700 I 0.832
AAC18597 Xenopus laevis AAC18597 I 0.832
O57526 Xenopus laevis O57526 I 0.832
AAB97457 Xenopus laevis AAB97457 I 0.832
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.830
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.830
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.823
O73932 Xenopus laevis O73932 I 0.822
AAI70477 Xenopus laevis AAI70477 I 0.822
AAC41285 Xenopus laevis AAC41285 I 0.822
AAI70479 Xenopus laevis AAI70479 I 0.822
AAI70196 Xenopus laevis AAI70196 I 0.822
AAC18598 Xenopus laevis AAC18598 I 0.822
AAI70224 Xenopus laevis AAI70224 I 0.822
IGF2BP3 Homo sapiens ENSG00000136231 D 0.802
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.802
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.802
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.802
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.802
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.800
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.799
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.794
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.791
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.787
IGF2BP1 Anolis carolinensis ENSACAG00000006199 I 0.781
igf2bp1 Danio rerio ENSDARG00000061478 I 0.774
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.771
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.771
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.771
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.768
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.768
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.768
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.768
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.768
IGF2BP1 Homo sapiens ENSG00000159217 D 0.768
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.768
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.766
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.766
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.766
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.766
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.764
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.761
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.761
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.756
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.748
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.744
igf2bp2a Danio rerio ENSDARG00000003421 I 0.744
LOC424865 Gallus gallus ENSGALG00000006523 I 0.739
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.738
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.736
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.736
IGF2BP2 Homo sapiens ENSG00000073792 D 0.736
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.734
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.734
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.734
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.730
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.728
IGF2BP3 Choloepus hoffmanni ENSCHOG00000002341 I 0.723
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.720
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.718
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.708