ROD1 (Procavia capensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPCAG00000002288 T40294_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000002157 RRM 97 150
ENSPCAP00000002157 RRM 217 283
ENSPCAP00000002157 RRM 393 459
ENSPCAP00000002157 RRM 510 539

Links

Other RRM family RBPs
Other Procavia capensis RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000019504 Pongo pygmaeus ENSPPYG00000019504 I 0.964
ROD1 Macaca mulatta ENSMMUG00000000464 I 0.964
ROD1 Pan troglodytes ENSPTRG00000021263 I 0.959
ROD1 Homo sapiens ENSG00000119314 I 0.955
ROD1 Tarsius syrichta ENSTSYG00000010375 N 0.942
ROD1 Sorex araneus ENSSARG00000002649 N 0.922
ROD1 Choloepus hoffmanni ENSCHOG00000002039 N 0.909
ROD1 Tursiops truncatus ENSTTRG00000009283 N 0.891
ROD1 Vicugna pacos ENSVPAG00000006136 N 0.863
ROD1 Loxodonta africana ENSLAFG00000011358 I 0.858
ROD1 Cavia porcellus ENSCPOG00000011586 I 0.846
ROD1 Oryctolagus cuniculus ENSOCUG00000017670 I 0.846
ROD1 Gorilla gorilla ENSGGOG00000001755 I 0.842
ROD1 Pteropus vampyrus ENSPVAG00000002177 N 0.839
ROD1 Sus scrofa ENSSSCG00000005466 I 0.835
ROD1 Equus caballus ENSECAG00000021243 I 0.835
Rod1 Mus musculus ENSMUSG00000028382 I 0.830
ROD1 Bos taurus ENSBTAG00000016750 I 0.827
ROD1 Callithrix jacchus ENSCJAG00000017686 I 0.826
Rod1 Rattus norvegicus ENSRNOG00000016334 I 0.826
ROD1 Monodelphis domestica ENSMODG00000005502 I 0.810
ROD1 Anolis carolinensis ENSACAG00000017316 I 0.798
ROD1 Canis familiaris ENSCAFG00000003015 I 0.798
rod1 Xenopus tropicalis ENSXETG00000002225 I 0.743