ROD1 (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000009283 T42608_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000008799 RRM 100 153
ENSTTRP00000008799 RRM 223 289
ENSTTRP00000008799 RRM 399 465
ENSTTRP00000008799 RRM 516 565

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ROD1 Choloepus hoffmanni ENSCHOG00000002039 N 0.912
ROD1 Sorex araneus ENSSARG00000002649 N 0.904
ENSPPYG00000019504 Pongo pygmaeus ENSPPYG00000019504 I 0.903
ROD1 Pan troglodytes ENSPTRG00000021263 I 0.899
ROD1 Macaca mulatta ENSMMUG00000000464 I 0.899
ROD1 Homo sapiens ENSG00000119314 I 0.895
ROD1 Tarsius syrichta ENSTSYG00000010375 N 0.895
ROD1 Procavia capensis ENSPCAG00000002288 N 0.891
ROD1 Sus scrofa ENSSSCG00000005466 I 0.870
ROD1 Equus caballus ENSECAG00000021243 I 0.870
ROD1 Oryctolagus cuniculus ENSOCUG00000017670 I 0.870
ROD1 Loxodonta africana ENSLAFG00000011358 I 0.870
ROD1 Cavia porcellus ENSCPOG00000011586 I 0.870
ROD1 Gorilla gorilla ENSGGOG00000001755 I 0.866
ROD1 Vicugna pacos ENSVPAG00000006136 N 0.866
ROD1 Bos taurus ENSBTAG00000016750 I 0.862
Rod1 Mus musculus ENSMUSG00000028382 I 0.854
Rod1 Rattus norvegicus ENSRNOG00000016334 I 0.850
ROD1 Callithrix jacchus ENSCJAG00000017686 I 0.850
ROD1 Monodelphis domestica ENSMODG00000005502 I 0.838
ROD1 Anolis carolinensis ENSACAG00000017316 I 0.826
ROD1 Canis familiaris ENSCAFG00000003015 I 0.826
ROD1 Pteropus vampyrus ENSPVAG00000002177 N 0.811
rod1 Xenopus tropicalis ENSXETG00000002225 I 0.771
ROD1 Danio rerio ENSDARG00000043757 I 0.727