ROD1 (Sorex araneus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSARG00000002649 T41283_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000002401 RRM 49 102
ENSSARP00000002401 RRM 172 238
ENSSARP00000002401 RRM 348 414
ENSSARP00000002401 RRM 465 506

Links

Other RRM family RBPs
Other Sorex araneus RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000019504 Pongo pygmaeus ENSPPYG00000019504 I 0.935
ROD1 Pan troglodytes ENSPTRG00000021263 I 0.930
ROD1 Macaca mulatta ENSMMUG00000000464 I 0.930
ROD1 Choloepus hoffmanni ENSCHOG00000002039 N 0.927
ROD1 Homo sapiens ENSG00000119314 I 0.926
ROD1 Tarsius syrichta ENSTSYG00000010375 N 0.926
ROD1 Procavia capensis ENSPCAG00000002288 N 0.922
ROD1 Tursiops truncatus ENSTTRG00000009283 N 0.904
ROD1 Vicugna pacos ENSVPAG00000006136 N 0.865
ROD1 Oryctolagus cuniculus ENSOCUG00000017670 I 0.854
ROD1 Cavia porcellus ENSCPOG00000011586 I 0.854
ROD1 Sus scrofa ENSSSCG00000005466 I 0.850
ROD1 Equus caballus ENSECAG00000021243 I 0.850
ROD1 Gorilla gorilla ENSGGOG00000001755 I 0.850
ROD1 Loxodonta africana ENSLAFG00000011358 I 0.846
ROD1 Bos taurus ENSBTAG00000016750 I 0.843
ROD1 Monodelphis domestica ENSMODG00000005502 I 0.838
Rod1 Mus musculus ENSMUSG00000028382 I 0.838
ROD1 Callithrix jacchus ENSCJAG00000017686 I 0.834
Rod1 Rattus norvegicus ENSRNOG00000016334 I 0.834
ROD1 Pteropus vampyrus ENSPVAG00000002177 N 0.830
ROD1 Anolis carolinensis ENSACAG00000017316 I 0.806
ROD1 Canis familiaris ENSCAFG00000003015 I 0.806
rod1 Xenopus tropicalis ENSXETG00000002225 I 0.751
ROD1 Danio rerio ENSDARG00000043757 I 0.715