ENSTTRG00000015563 (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000015563 T42677_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.757
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.757
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.757
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000014747 RRM 37 106
ENSTTRP00000014747 RRM 128 195

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

68 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPPYG00000012967 Pongo pygmaeus ENSPPYG00000012967 I 0.786
ENSRNOG00000042377 Rattus norvegicus ENSRNOG00000042377 I 0.779
D4A6Z0_RAT Rattus norvegicus ENSRNOG00000042924 N 0.771
D4A8U2_RAT Rattus norvegicus ENSRNOG00000007252 I 0.770
ENSPPYG00000001326 Pongo pygmaeus ENSPPYG00000001326 I 0.770
ENSRNOG00000030250 Rattus norvegicus ENSRNOG00000030250 I 0.770
HNRNPA3 Loxodonta africana ENSLAFG00000027712 I 0.770
D3ZK54_RAT Rattus norvegicus ENSRNOG00000025482 I 0.769
Hnrnpa3 Mus musculus ENSMUSG00000059005 I 0.766
ENSMMUG00000001858 Macaca mulatta ENSMMUG00000001858 I 0.766
HNRNPA3 Macropus eugenii ENSMEUG00000013622 I 0.766
HNRNPA3 Gorilla gorilla ENSGGOG00000006130 I 0.766
Gm8991 Mus musculus ENSMUSG00000059179 I 0.766
HNRNPA3 Myotis lucifugus ENSMLUG00000003906 I 0.766
HNRNPA3 Pteropus vampyrus ENSPVAG00000010380 I 0.766
HNRNPA3 Sus scrofa ENSSSCG00000015988 I 0.766
HNRNPA3 Tursiops truncatus ENSTTRG00000014225 I 0.766
ROA3_RAT Rattus norvegicus ENSRNOG00000027001 I 0.766
LOC100360986 Rattus norvegicus ENSRNOG00000001556 I 0.766
HNRNPA3 Homo sapiens ENSG00000170144 I 0.766
HNRNPA3 Pan troglodytes ENSPTRG00000012676 I 0.766
HNRNPA3 Monodelphis domestica ENSMODG00000019803 I 0.766
HNRNPA3 Cavia porcellus ENSCPOG00000011301 I 0.766
LOC100411573 Callithrix jacchus ENSCJAG00000023383 I 0.766
LOC781499 Bos taurus ENSBTAG00000021580 I 0.766
HNRNPA3 Dasypus novemcinctus ENSDNOG00000019022 I 0.766
ENSCAFG00000013497 Canis familiaris ENSCAFG00000013497 I 0.766
ENSDORG00000011155 Dipodomys ordii ENSDORG00000011155 I 0.765
ENSMODG00000024570 Monodelphis domestica ENSMODG00000024570 I 0.764
ENSCPOG00000004251 Cavia porcellus ENSCPOG00000004251 I 0.761
HNRNPA3 Felis catus ENSFCAG00000012146 I 0.760
HNRNPA3 Oryctolagus cuniculus ENSOCUG00000002743 I 0.760
HNRNPA3 Anolis carolinensis ENSACAG00000012234 I 0.760
LOC100066794 Equus caballus ENSECAG00000023237 I 0.760
D3ZB98_RAT Rattus norvegicus ENSRNOG00000029641 I 0.757
ENSRNOG00000043173 Rattus norvegicus ENSRNOG00000043173 I 0.757
D3ZX95_RAT Rattus norvegicus ENSRNOG00000027006 I 0.755
HNRNPA3 Meleagris gallopavo ENSMGAG00000009565 I 0.753
HNRPA3 Gallus gallus ENSGALG00000009250 I 0.753
HNRNPA3 Taeniopygia guttata ENSTGUG00000008996 I 0.753
D3ZXA3_RAT Rattus norvegicus ENSRNOG00000038905 I 0.747
D3ZTB7_RAT Rattus norvegicus ENSRNOG00000031608 I 0.747
ENSRNOG00000033211 Rattus norvegicus ENSRNOG00000033211 I 0.743
ENSOCUG00000006431 Oryctolagus cuniculus ENSOCUG00000006431 I 0.742
ENSRNOG00000024652 Rattus norvegicus ENSRNOG00000024652 I 0.741
CBU92451 Xenopus laevis CBU92451 I 0.740
CBF67578 Xenopus laevis CBF67578 I 0.740
AAI69881 Xenopus laevis AAI69881 I 0.740
AAA49950 Xenopus laevis AAA49950 I 0.740
P51992 Xenopus laevis P51992 I 0.740
ENSCJAG00000008584 Callithrix jacchus ENSCJAG00000008584 I 0.740
ENSRNOG00000013650 Rattus norvegicus ENSRNOG00000013650 I 0.740
ENSSSCG00000015989 Sus scrofa ENSSSCG00000015989 I 0.735
D3ZNE1_RAT Rattus norvegicus ENSRNOG00000005671 I 0.735
ENSCAFG00000023240 Canis familiaris ENSCAFG00000023240 I 0.730
ENSPPYG00000001012 Pongo pygmaeus ENSPPYG00000001012 I 0.729
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.727
HNRNPA3 Microcebus murinus ENSMICG00000005513 I 0.727
ENSCJAG00000006928 Callithrix jacchus ENSCJAG00000006928 I 0.727
D3ZB90_RAT Rattus norvegicus ENSRNOG00000038392 N 0.727
ENSEEUG00000000925 Erinaceus europaeus ENSEEUG00000000925 I 0.727
D4ACP9_RAT Rattus norvegicus ENSRNOG00000021929 I 0.725
P51968 Xenopus laevis P51968 I 0.721
AAA49949 Xenopus laevis AAA49949 I 0.721
HNRNPA3 Sorex araneus ENSSARG00000007605 I 0.708
ENSGGOG00000022020 Gorilla gorilla ENSGGOG00000022020 I 0.708
ENSPTRG00000018253 Pan troglodytes ENSPTRG00000018253 I 0.706
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.704