RBMS3 (Sus scrofa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSSCG00000011222 T41476_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMS3
M164_0.6 		Homo sapiens HAUAUA RNAcompete
Ray et al.(2013)
RNCMPT00173 		0.948
RBMS3
M055_0.6 		Homo sapiens MUAUAKM RNAcompete
Ray et al.(2013)
RNCMPT00057 		0.948
RBMS1
M143_0.6 		Homo sapiens KAUAUAS RNAcompete
Ray et al.(2013)
RNCMPT00152 		0.828
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000011971 RRM 63 128
ENSSSCP00000011971 RRM 144 208

Links

Other RRM family RBPs
Other Sus scrofa RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMS3 Loxodonta africana ENSLAFG00000000354 I 0.955
RBMS3 Macaca mulatta ENSMMUG00000004404 I 0.955
RBMS3 Gorilla gorilla ENSGGOG00000007228 I 0.955
RBMS3 Cavia porcellus ENSCPOG00000006457 I 0.955
RBMS3 Callithrix jacchus ENSCJAG00000004312 I 0.955
RBMS3 Monodelphis domestica ENSMODG00000015125 I 0.955
Rbms3 Mus musculus ENSMUSG00000039607 I 0.955
RBMS3 Pan troglodytes ENSPTRG00000014709 I 0.955
RBMS3 Sorex araneus ENSSARG00000000695 I 0.955
RBMS3 Ochotona princeps ENSOPRG00000006808 I 0.955
RBMS3 Oryctolagus cuniculus ENSOCUG00000004840 I 0.955
RBMS3 Ornithorhynchus anatinus ENSOANG00000010529 I 0.955
RBMS3 Bos taurus ENSBTAG00000044062 I 0.955
RBMS3 Homo sapiens ENSG00000144642 D 0.955
RBMS3 Tupaia belangeri ENSTBEG00000005362 I 0.955
RBMS3 Gallus gallus ENSGALG00000011439 I 0.947
RBMS3 Tursiops truncatus ENSTTRG00000006202 I 0.947
rbms3 Danio rerio ENSDARG00000044574 I 0.918
RBMS3 Tetraodon nigroviridis ENSTNIG00000013818 I 0.918
RBMS3 Oryzias latipes ENSORLG00000005370 I 0.917
RBMS3 Gasterosteus aculeatus ENSGACG00000003155 I 0.911
RBMS3 Vicugna pacos ENSVPAG00000003842 I 0.896
RBMS3 Myotis lucifugus ENSMLUG00000000659 I 0.895
RBMS3 Gasterosteus aculeatus ENSGACG00000006377 I 0.889
RBMS3 Takifugu rubripes ENSTRUG00000009128 I 0.888
RBMS3 Tetraodon nigroviridis ENSTNIG00000013819 I 0.882
RBMS3 Pteropus vampyrus ENSPVAG00000014037 I 0.857
RBMS3 Erinaceus europaeus ENSEEUG00000014337 I 0.848
RBMS1 Vicugna pacos ENSVPAG00000002716 I 0.842
RBMS1 Equus caballus ENSECAG00000019894 I 0.842
Rbms1 Mus musculus ENSMUSG00000026970 I 0.835
RBMS1 Anolis carolinensis ENSACAG00000011984 I 0.830
RBMS1 Gorilla gorilla ENSGGOG00000001264 I 0.828
RBMS2 Danio rerio ENSDARG00000056150 I 0.828
RBMS1 Tarsius syrichta ENSTSYG00000005584 I 0.828
RBMS1 Pteropus vampyrus ENSPVAG00000010429 I 0.828
RBMS1 Homo sapiens ENSG00000153250 D 0.828
RBMS1 Loxodonta africana ENSLAFG00000017217 I 0.828
Rbms1 Dipodomys ordii ENSDORG00000007103 I 0.828
RBMS1 Pan troglodytes ENSPTRG00000012573 I 0.828
RBMS1 Macaca mulatta ENSMMUG00000016825 I 0.828
RBMS1 Oryctolagus cuniculus ENSOCUG00000017365 I 0.828
RBMS1 Otolemur garnettii ENSOGAG00000002900 I 0.828
RBMS1_BOVIN Bos taurus ENSBTAG00000005180 I 0.828
Ame_R017740 Ailuropoda melanoleuca Ame_R017740 I 0.828
RBMS1 Sus scrofa ENSSSCG00000015888 I 0.828
RBMS1 Canis familiaris ENSCAFG00000009922 I 0.828
RBMS2 Oryzias latipes ENSORLG00000015426 I 0.828
A6ML07_CALJA Callithrix jacchus ENSCJAG00000014861 I 0.828
RBMS1 Monodelphis domestica ENSMODG00000005250 I 0.828
RBMS1 Tursiops truncatus ENSTTRG00000011058 I 0.828
RBMS1 Procavia capensis ENSPCAG00000009673 I 0.828
RBMS2 Gasterosteus aculeatus ENSGACG00000009332 I 0.827
RBMS1 Ornithorhynchus anatinus ENSOANG00000006166 I 0.822
RBMS1 Spermophilus tridecemlineatus ENSSTOG00000012501 I 0.821
ENSPPYG00000012879 Pongo pygmaeus ENSPPYG00000012879 I 0.821
RBMS1 Cavia porcellus ENSCPOG00000012310 I 0.821
Rbms1 Rattus norvegicus ENSRNOG00000008482 I 0.821
RBMS2 Gasterosteus aculeatus ENSGACG00000000617 I 0.821
RBMS2 Takifugu rubripes ENSTRUG00000008492 I 0.815
RBMS2 Anolis carolinensis ENSACAG00000016623 I 0.813
RBMS1 Meleagris gallopavo ENSMGAG00000011054 I 0.813
RBMS2 Cavia porcellus ENSCPOG00000008256 I 0.813
RBMS2 Macaca mulatta ENSMMUG00000019330 I 0.813
RBMS2 Homo sapiens ENSG00000076067 I 0.813
RBMS1 Taeniopygia guttata ENSTGUG00000006606 I 0.813
RBMS2 Callithrix jacchus ENSCJAG00000010803 I 0.813
ENSPPYG00000004665 Pongo pygmaeus ENSPPYG00000004665 I 0.813
RBMS2 Pan troglodytes ENSPTRG00000005104 I 0.813
rbms2 Xenopus tropicalis ENSXETG00000021787 I 0.813
RBMS2 Loxodonta africana ENSLAFG00000008251 I 0.813
O73664_CHICK Gallus gallus ENSGALG00000011132 I 0.813
RBMS2 Oryzias latipes ENSORLG00000007807 I 0.812
RBMS2 Tetraodon nigroviridis ENSTNIG00000015056 I 0.812
RBMS2 Equus caballus ENSECAG00000013470 I 0.806
Rbms2 Dipodomys ordii ENSDORG00000009231 I 0.806
Rbms2 Mus musculus ENSMUSG00000040043 I 0.806
RBMS2 Oryctolagus cuniculus ENSOCUG00000006073 I 0.806
RBMS2 Sus scrofa ENSSSCG00000000402 I 0.806
RBMS2 Vicugna pacos ENSVPAG00000004022 I 0.806
RBMS2 Pteropus vampyrus ENSPVAG00000007616 I 0.806
RBMS1 Tupaia belangeri ENSTBEG00000016156 I 0.806
RBMS2 Takifugu rubripes ENSTRUG00000006839 I 0.805
ENSG00000213250 Homo sapiens ENSG00000213250 I 0.800
RBMS2 Tetraodon nigroviridis ENSTNIG00000014563 I 0.800
Ame_R003849 Ailuropoda melanoleuca Ame_R003849 I 0.799
Rbms2 Rattus norvegicus ENSRNOG00000003076 I 0.799
RBMS2 Canis familiaris ENSCAFG00000000134 I 0.799
RBMS2_BOVIN Bos taurus ENSBTAG00000017830 I 0.799
RBMS3 Choloepus hoffmanni ENSCHOG00000000758 I 0.797
rbms1a Danio rerio ENSDARG00000074023 I 0.793
RBMS1 Danio rerio ENSDARG00000057768 I 0.791
ENSGGOG00000028247 Gorilla gorilla ENSGGOG00000028247 I 0.791
AAH43623 Xenopus laevis AAH43623 I 0.791
RBMS1 Tetraodon nigroviridis ENSTNIG00000016496 I 0.785
RBMS3 Macropus eugenii ENSMEUG00000004772 I 0.782
RBMS3 Dasypus novemcinctus ENSDNOG00000016645 I 0.782
RBMS2 Macropus eugenii ENSMEUG00000015616 I 0.776
RBMS3 Echinops telfairi ENSETEG00000009485 I 0.774
RBMS1 Oryzias latipes ENSORLG00000016818 I 0.763
RBMS2 Tupaia belangeri ENSTBEG00000009515 I 0.763
RBMS1 Gasterosteus aculeatus ENSGACG00000005671 I 0.757
RBMS1 Takifugu rubripes ENSTRUG00000005466 I 0.756
RBMS3 Tarsius syrichta ENSTSYG00000002615 I 0.748
RBMS3 Procavia capensis ENSPCAG00000006307 I 0.719
RBMS2 Tursiops truncatus ENSTTRG00000002117 I 0.709
D4A288_RAT Rattus norvegicus ENSRNOG00000023845 I 0.706