SB06G029180 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb06g029180 T46029_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb06g029180.1 RRM 94 164
Sb06g029180.1 RRM 184 255
Sb06g029180.1 RRM 290 354

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G012628 Zea mays GRMZM2G012628 N 0.976
BGIOSIBCE016680 Oryza indica BGIOSIBCE016680 N 0.889
LOC_Os04g53440 Oryza sativa LOC_Os04g53440 N 0.889
BRADI5G22410 Brachypodium distachyon BRADI5G22410 N 0.880
GRMZM2G426591 Zea mays GRMZM2G426591 N 0.865
BRADI3G15180 Brachypodium distachyon BRADI3G15180 N 0.861
BGIOSIBSE038779 Oryza indica BGIOSIBSE038779 N 0.837
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.832
Glyma07g38940.1 Glycine max Glyma07g38940.1 I 0.726
chr6.CM0139.780.nd Lotus japonicus chr6.CM0139.780.nd I 0.721
mgf010468m Mimulus guttatus mgf010468m I 0.721
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.721
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.721
Glyma17g01800.1 Glycine max Glyma17g01800.1 I 0.721
Glyma13g27570.1 Glycine max Glyma13g27570.1 I 0.721
Glyma15g11380.1 Glycine max Glyma15g11380.1 I 0.716
PK10695.1 Cannabis sativa PK10695.1 I 0.712
MDP0000294628 Malus x domestica MDP0000294628 I 0.712
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.707
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.707
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.707
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.707
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.707
chr4.CM1334.150.nc Lotus japonicus chr4.CM1334.150.nc N 0.702