BRADI3G15180 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G15180 T33231_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G15180.1 RRM 100 169
BRADI3G15180.1 RRM 190 261
BRADI3G15180.1 RRM 295 359
BRADI3G15180.3 RRM 100 169
BRADI3G15180.3 RRM 190 261
BRADI3G15180.3 RRM 295 359

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBSE038779 Oryza indica BGIOSIBSE038779 N 0.879
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.874
LOC_Os04g53440 Oryza sativa LOC_Os04g53440 N 0.870
BGIOSIBCE016680 Oryza indica BGIOSIBCE016680 N 0.870
BRADI5G22410 Brachypodium distachyon BRADI5G22410 N 0.870
GRMZM2G426591 Zea mays GRMZM2G426591 N 0.865
GRMZM2G012628 Zea mays GRMZM2G012628 N 0.861
SB06G029180 Sorghum bicolor Sb06g029180 N 0.861
Glyma13g27570.1 Glycine max Glyma13g27570.1 I 0.763
Glyma07g38940.1 Glycine max Glyma07g38940.1 I 0.758
Glyma15g11380.1 Glycine max Glyma15g11380.1 I 0.758
Glyma17g01800.1 Glycine max Glyma17g01800.1 I 0.754
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.750
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.745
chr6.CM0139.780.nd Lotus japonicus chr6.CM0139.780.nd I 0.744
PK10695.1 Cannabis sativa PK10695.1 I 0.740
mgf010468m Mimulus guttatus mgf010468m I 0.736
chr4.CM1334.150.nc Lotus japonicus chr4.CM1334.150.nc N 0.734
Medtr8g146650 Medicago truncatula Medtr8g146650 N 0.729
29842.m003612 Ricinus communis 29842.m003612 N 0.720
B9H1C9_POPTR Populus trichocarpa POPTR_0004s01690 N 0.715
SB01G016170 Sorghum bicolor Sb01g016170 N 0.715
MDP0000294628 Malus x domestica MDP0000294628 I 0.712
ATRBP45B Arabidopsis thaliana AT1G11650-TAIR-G N 0.710
XM_002889837.1 Arabidopsis lyrata fgenesh2_kg.1__1255__AT1G11650.2 N 0.710
PDK_20s1343381g001 Phoenix dactylifera PDK_20s1343381g001 N 0.710
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.707
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.707
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.707
SB01G045570 Sorghum bicolor Sb01g045570 I 0.707
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.707
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.707
LOC_Os03g07800 Oryza sativa LOC_Os03g07800 I 0.702