BRADI5G22410 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI5G22410 T33320_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G22410.1 RRM 90 159
BRADI5G22410.1 RRM 180 251
BRADI5G22410.1 RRM 286 350
BRADI5G22410.2 RRM 90 159
BRADI5G22410.2 RRM 180 251
BRADI5G22410.2 RRM 286 350
BRADI5G22410.3 RRM 90 159
BRADI5G22410.3 RRM 180 251
BRADI5G22410.3 RRM 286 350

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE016680 Oryza indica BGIOSIBCE016680 N 0.885
LOC_Os04g53440 Oryza sativa LOC_Os04g53440 N 0.885
SB06G029180 Sorghum bicolor Sb06g029180 N 0.880
GRMZM2G012628 Zea mays GRMZM2G012628 N 0.880
LOC_Os08g09100 Oryza sativa LOC_Os08g09100 N 0.874
BGIOSIBSE038779 Oryza indica BGIOSIBSE038779 N 0.870
BRADI3G15180 Brachypodium distachyon BRADI3G15180 N 0.870
GRMZM2G426591 Zea mays GRMZM2G426591 N 0.846
Cucsa.085920 Cucumis sativus Cucsa.085920 I 0.731
Cucsa.085910 Cucumis sativus Cucsa.085910 I 0.731
mgf010468m Mimulus guttatus mgf010468m I 0.726
Glyma17g01800.1 Glycine max Glyma17g01800.1 I 0.725
Glyma07g38940.1 Glycine max Glyma07g38940.1 I 0.720
Glyma13g27570.1 Glycine max Glyma13g27570.1 I 0.710
PK10695.1 Cannabis sativa PK10695.1 I 0.707
cassava35506.valid.m1 Manihot esculenta cassava35506.valid.m1 I 0.707
B9H1C9_POPTR Populus trichocarpa POPTR_0004s01690 N 0.705
29842.m003612 Ricinus communis 29842.m003612 N 0.705
Glyma15g11380.1 Glycine max Glyma15g11380.1 I 0.705
chr6.CM0139.780.nd Lotus japonicus chr6.CM0139.780.nd I 0.705
cassava37003.valid.m1 Manihot esculenta cassava37003.valid.m1 I 0.702
LOC_Os03g37270 Oryza sativa LOC_Os03g37270 N 0.702
cassava36999.valid.m1 Manihot esculenta cassava36999.valid.m1 I 0.702
cassava37000.valid.m1 Manihot esculenta cassava37000.valid.m1 I 0.702
cassava37002.valid.m1 Manihot esculenta cassava37002.valid.m1 I 0.702
cassava37001.valid.m1 Manihot esculenta cassava37001.valid.m1 I 0.702
SB01G016170 Sorghum bicolor Sb01g016170 N 0.700