estExt_fgenesh1_kg.C_60003 (Myceliophthora thermophila)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_fgenesh1_kg.C_60003 T04980_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_60003 CCCH ZF 48 72
estExt_fgenesh1_kg.C_60003 CCCH ZF 76 100

Links

Other CCCH ZF family RBPs
Other Myceliophthora thermophila RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08315.1 Alternaria brassicicola AB08315.1 N 0.706
ADR062W Ashbya gossypii ADR062W N 0.725
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.740
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.960
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.700
CTRG_02259 Candida tropicalis CTRG_02259 N 0.706
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.700
EAT89389.2 Phaeosphaeria nodorum EAT89389.2 N 0.706
estExt_fgenesh1_pg.C_160206 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160206 N 0.706
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.960
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.940
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.940
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.940
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.940
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.900
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.960
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.720
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.900
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.900
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.920
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.940
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.765
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.920
NCU05007 Neurospora crassa NCU05007 N 0.940
orf19.7385 Candida albicans orf19.7385 N 0.700
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.940
PTRG_01963 Pyrenophora tritici repentis PTRG_01963 N 0.706
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.765
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.725
SJAG_01535 Schizosaccharomyces japonicus SJAG_01535 N 0.700
SJAG_03191 Schizosaccharomyces japonicus SJAG_03191 N 0.700
SNOG_02658 Stagonospora nodorum SNOG_02658 N 0.706
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.880
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.880
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.720