ENSRNOG00000019487 (Rattus norvegicus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSRNOG00000019487 T19443_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.847
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.815
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.794
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.794
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.746
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000050308 KH 18 77
ENSRNOP00000050308 KH 100 159
ENSRNOP00000050308 KH 246 308

Links

Other KH family RBPs
Other Rattus norvegicus RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH41241 Xenopus laevis AAH41241 I 0.857
AAH84195 Xenopus laevis AAH84195 I 0.857
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.815
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.778
CAB50743 Xenopus laevis CAB50743 I 0.857
CAD29864 Xenopus laevis CAD29864 I 0.857
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.873
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.772
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.767
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.815
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.873
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.767
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.873
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.794
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.772
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.783
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.836
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.862
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.799
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.873
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.873
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.772
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.815
pcbp2 Danio rerio ENSDARG00000013184 D 0.841
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.873
LOC100050579 Equus caballus ENSECAG00000002544 I 0.815
LOC100050101 Equus caballus ENSECAG00000012413 I 0.772
PCBP2 Equus caballus ENSECAG00000022389 I 0.873
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.784
PCBP1 Homo sapiens ENSG00000169564 D 0.815
PCBP3 Homo sapiens ENSG00000183570 I 0.772
PCBP2 Homo sapiens ENSG00000197111 D 0.873
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.757
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.820
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.831
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.762
PCBP3 Gallus gallus ENSGALG00000004394 I 0.746
PCBP3 Gallus gallus ENSGALG00000013155 I 0.772
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.772
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.873
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.815
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.873
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.788
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.735
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.772
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.725
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.873
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.784
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.815
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.772
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.873
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.873
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.794
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.772
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.815
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.873
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.772
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.815
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.873
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.729
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.873
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.732
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.836
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.831
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.873
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.873
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.815
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.873
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.815
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.772
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.873
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.772
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.733
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.815
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.984
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.873
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.741
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.772
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.747
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.762
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.831
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.762
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.836
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.825
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.762
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.825
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.772
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.873
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.857