PCBP3 (Ochotona princeps)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOPRG00000003431 T19245_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.948
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.832
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.832
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.812
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.812
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000003142 KH 12 70
ENSOPRP00000003142 KH 94 157
ENSOPRP00000003142 KH 280 342

Links

Other KH family RBPs
Other Ochotona princeps RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP3 Homo sapiens ENSG00000183570 I 0.953
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.953
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.953
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.948
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.948
LOC100050101 Equus caballus ENSECAG00000012413 I 0.948
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.948
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.948
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.948
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.948
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.948
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.948
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.948
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.937
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.927
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.927
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.927
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.921
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.916
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.914
PCBP3 Gallus gallus ENSGALG00000013155 I 0.911
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.911
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.909
PCBP3 Gallus gallus ENSGALG00000004394 I 0.906
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.906
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.904
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.904
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.901
pcbp3 Danio rerio ENSDARG00000054378 I 0.898
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.880
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.866
PCBP3 Felis catus ENSFCAG00000014812 I 0.866
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.864
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.832
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.832
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.832
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.832
pcbp2 Danio rerio ENSDARG00000013184 D 0.832
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.832
PCBP2 Equus caballus ENSECAG00000022389 I 0.832
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.832
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.832
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.832
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.832
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.832
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.832
PCBP2 Homo sapiens ENSG00000197111 D 0.832
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.832
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.832
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.832
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.832
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.832
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.832
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.832
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.832
AAH41241 Xenopus laevis AAH41241 I 0.827
AAH84195 Xenopus laevis AAH84195 I 0.827
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.827
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.827
CAD29864 Xenopus laevis CAD29864 I 0.827
CAB50743 Xenopus laevis CAB50743 I 0.827
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.822
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.817
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.812
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.812
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.812
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.812
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.812
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.812
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.812
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.812
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.812
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.812
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.812
LOC100050579 Equus caballus ENSECAG00000002544 I 0.812
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.812
PCBP1 Homo sapiens ENSG00000169564 D 0.812
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.812
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.806
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.806
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.806
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.801
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.801
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.786
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.785
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.785
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.785
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.775
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.770
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.760
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.759
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.754
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.749
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.746
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.741
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.740
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.740
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.734
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.734
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.731
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.729
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.725
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.724
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.724
PCBP3 Procavia capensis ENSPCAG00000001454 I 0.723
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.715
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.710