PCBP3 (Gallus gallus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGALG00000004394 T18862_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.957
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.846
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.846
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.835
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.835
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000006993 KH 15 75
ENSGALP00000006993 KH 99 162
ENSGALP00000006993 KH 263 325

Links

Other KH family RBPs
Other Gallus gallus RBPs

124 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.957
PCBP3 Homo sapiens ENSG00000183570 I 0.957
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.957
LOC100050101 Equus caballus ENSECAG00000012413 I 0.957
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.957
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.957
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.957
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.957
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.957
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.957
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.957
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.957
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.957
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.947
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.941
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.941
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.936
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.936
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.926
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.920
PCBP3 Gallus gallus ENSGALG00000013155 I 0.920
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.915
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.910
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.906
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.894
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.872
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.867
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.867
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.867
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.862
pcbp3 Danio rerio ENSDARG00000054378 I 0.851
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.846
PCBP2 Equus caballus ENSECAG00000022389 I 0.846
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.846
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.846
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.846
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.846
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.846
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.846
pcbp2 Danio rerio ENSDARG00000013184 D 0.846
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.846
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.846
PCBP2 Homo sapiens ENSG00000197111 D 0.846
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.846
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.846
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.846
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.846
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.846
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.846
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.846
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.846
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.846
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.846
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.840
AAH41241 Xenopus laevis AAH41241 I 0.840
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.840
CAB50743 Xenopus laevis CAB50743 I 0.840
CAD29864 Xenopus laevis CAD29864 I 0.840
AAH84195 Xenopus laevis AAH84195 I 0.840
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.835
PCBP1 Homo sapiens ENSG00000169564 D 0.835
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.835
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.835
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.835
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.835
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.835
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.835
LOC100050579 Equus caballus ENSECAG00000002544 I 0.835
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.835
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.835
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.835
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.835
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.830
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.830
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.824
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.824
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.824
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.819
PCBP3 Felis catus ENSFCAG00000014812 I 0.819
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.819
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.819
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.814
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.814
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.809
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.809
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.798
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.787
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.784
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.777
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.774
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.771
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.765
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.762
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.762
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.761
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.751
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.751
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.747
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.747
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.746
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.745
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.741
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.741
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.737
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.732
PCBP3 Procavia capensis ENSPCAG00000001454 I 0.729
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.725
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.721
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.716
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.716
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.716
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.716
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.716
PCBP4 Homo sapiens ENSG00000090097 I 0.716
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.716
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.716
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.716
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.716
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.716
LOC100060660 Equus caballus ENSECAG00000024218 I 0.716
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.714
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.708
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.707
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.703