FUBP3 (Tetraodon nigroviridis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTNIG00000005858 T19603_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000003989 KH 80 142
ENSTNIP00000003989 KH 165 229
ENSTNIP00000003989 KH 256 317
ENSTNIP00000003989 KH 355 420
ENSTNIP00000008581 KH 80 143
ENSTNIP00000008581 KH 166 230
ENSTNIP00000008581 KH 257 318
ENSTNIP00000008581 KH 356 421

Links

Other KH family RBPs
Other Tetraodon nigroviridis RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44277 Xenopus laevis AAH44277 I 0.729
AAH60400 Xenopus laevis AAH60400 N 0.825
AAH70981 Xenopus laevis AAH70981 I 0.744
AAI69815 Xenopus laevis AAI69815 I 0.744
AAN77161 Xenopus laevis AAN77161 I 0.728
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.833
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.764
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.767
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.767
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.837
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.829
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.767
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.767
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.767
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.837
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.767
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.833
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.875
fubp1 Danio rerio ENSDARG00000029248 I 0.736
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.817
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.767
FUBP1 Equus caballus ENSECAG00000010867 I 0.767
LOC100069755 Equus caballus ENSECAG00000011500 N 0.813
FUBP3 Felis catus ENSFCAG00000005113 N 0.833
FUBP3 Homo sapiens ENSG00000107164 N 0.833
FUBP1 Homo sapiens ENSG00000162613 I 0.771
FUBP3 Gasterosteus aculeatus ENSGACG00000000957 N 0.810
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.702
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.723
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.802
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.833
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.764
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.833
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.771
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.767
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.829
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.833
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.760
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.833
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.770
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.767
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.771
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.833
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.829
Fubp3 Mus musculus ENSMUSG00000026843 N 0.829
Fubp1 Mus musculus ENSMUSG00000028034 I 0.764
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.833
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.767
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.718
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.724
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.767
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.714
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.833
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.733
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.817
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.965
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.805
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.767
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.771
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.833
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.771
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.833
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.837
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.825
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.767
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.767
FUBP3 Sus scrofa ENSSSCG00000005702 N 0.732
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.760
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.825
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.750
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.805
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.729
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.980
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.802
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.767
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.767
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.767
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.833
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.748