mgf005196m (Mimulus guttatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 mgf005196m T21285_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf005196m KH 145 219

Links

Other KH family RBPs
Other Mimulus guttatus RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
27955.m000377 Ricinus communis 27955.m000377 N 0.907
29945.m000086 Ricinus communis 29945.m000086 N 0.760
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.872
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.853
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.760
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.711
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.702
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.880
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.720
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.893
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.882
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.960
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.895
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.853
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.872
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.827
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.843
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.947
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.800
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.827
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.880
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.771
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.933
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.789
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.763
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.789
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.893
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.933
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.773
MDP0000119110 Malus x domestica MDP0000119110 N 0.893
MDP0000186494 Malus x domestica MDP0000186494 N 0.920
MDP0000501473 Malus x domestica MDP0000501473 N 0.893
MDP0000665847 Malus x domestica MDP0000665847 N 0.920
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.840
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.723
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.908
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.893
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.893
mgf011994m Mimulus guttatus mgf011994m N 0.750
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.840
PK22673.1 Cannabis sativa PK22673.1 N 0.853
PK23097.1 Cannabis sativa PK23097.1 N 0.907
POPTR_0001s47500 Populus trichocarpa POPTR_0001s47500 N 0.705
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.947
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.733
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.824
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.787
ppa009701m Prunus persica ppa009701m N 0.947
SB01G003680 Sorghum bicolor Sb01g003680 N 0.776
SB02G006770 Sorghum bicolor Sb02g006770 N 0.776