TIA1 (Loxodonta africana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSLAFG00000003463 T37978_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.995
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.995
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000002886 RRM 9 77
ENSLAFP00000002886 RRM 108 178
ENSLAFP00000002886 RRM 216 280

Links

Other RRM family RBPs
Other Loxodonta africana RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH77169 Xenopus laevis AAH77169 I 0.927
AAH80105 Xenopus laevis AAH80105 I 0.941
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.995
CAC95018 Xenopus laevis CAC95018 I 0.927
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 1.000
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.883
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.898
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 1.000
TIA1 Canis familiaris ENSCAFG00000003341 I 0.995
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.829
TIA1 Choloepus hoffmanni ENSCHOG00000003904 I 0.702
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.995
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.829
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.995
tial1 Danio rerio ENSDARG00000009525 I 0.878
tia1l Danio rerio ENSDARG00000026476 I 0.868
tia1 Danio rerio ENSDARG00000052536 I 0.937
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.734
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.995
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.932
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.788
TIAL1 Equus caballus ENSECAG00000009970 I 0.898
TIA1 Equus caballus ENSECAG00000022361 I 0.771
TIA1 Echinops telfairi ENSETEG00000010021 I 0.995
TIA1 Homo sapiens ENSG00000116001 D 0.995
TIAL1 Homo sapiens ENSG00000151923 D 0.898
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.850
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.883
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.912
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.829
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.995
TIAL1 Gorilla gorilla ENSGGOG00000001816 I 0.711
TIA1 Macropus eugenii ENSMEUG00000013220 I 0.707
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.990
TIA1 Microcebus murinus ENSMICG00000002434 I 0.702
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.995
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.898
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.829
TIA1 Monodelphis domestica ENSMODG00000011515 I 1.000
Tial1 Mus musculus ENSMUSG00000030846 I 0.898
Tia1 Mus musculus ENSMUSG00000071337 I 0.990
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.761
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.893
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.995
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.995
TIA1 Ochotona princeps ENSOPRG00000001066 I 0.741
TIAL1 Ochotona princeps ENSOPRG00000016546 I 0.712
TIA1 Oryzias latipes ENSORLG00000002529 I 0.912
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.824
TIA1 Oryzias latipes ENSORLG00000015642 I 0.932
TIA1 Procavia capensis ENSPCAG00000001859 I 0.741
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.824
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.829
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.980
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.829
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.995
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.995
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.824
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.985
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.829
TIA1 Sorex araneus ENSSARG00000001997 I 0.839
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.898
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.883
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.946
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.932
TIAL1 Tetraodon nigroviridis ENSTNIG00000013091 I 0.703
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.912
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.912
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.932
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.773
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.829
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.995
TIAL1 Tursiops truncatus ENSTTRG00000014574 I 0.714
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.795
TIA1 Vicugna pacos ENSVPAG00000007449 I 0.805
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.946
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.785
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.780