CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PK22510.1
(
Cannabis sativa
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PK22510.1
T17963_0.6
Cannabis sativa genome (2012-Feb-20)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK22510.1
KH
156
205
FVKRRQHLIGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIV
Links
Other
KH
family RBPs
Other
Cannabis sativa
RBPs
117 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSOCUG00000023444
Oryctolagus cuniculus
ENSOCUG00000023444
I
0.000
ENSCAFG00000018581
Canis familiaris
ENSCAFG00000018581
N
0.000
ENSTBEG00000002499
Tupaia belangeri
ENSTBEG00000002499
N
0.000
HNRNPA2B1
Sorex araneus
ENSSARG00000007984
N
0.000
ENSPTRG00000019356
Pan troglodytes
ENSPTRG00000019356
N
0.000
ENSPPYG00000018709
Pongo pygmaeus
ENSPPYG00000018709
N
0.000
HNRNPA3
Macaca mulatta
ENSMMUG00000011937
N
0.000
ENSMICG00000010912
Microcebus murinus
ENSMICG00000010912
N
0.000
ENSMEUG00000008083
Macropus eugenii
ENSMEUG00000008083
N
0.000
Ame_R004137
Ailuropoda melanoleuca
Ame_R004137
N
0.000