ENSOCUG00000021782 (Oryctolagus cuniculus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOCUG00000021782 T39746_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.972
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.972
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.972
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.972
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000015794 RRM 12 82

Links

Other RRM family RBPs
Other Oryctolagus cuniculus RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Fusip1 Homo sapiens ENSG00000188529 D 0.972
AAH84231 Xenopus laevis AAH84231 I 0.833
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.000
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.972
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.808
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.972
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.822
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.972
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.972
SRSF12 Ochotona princeps ENSOPRG00000016052 I 0.000
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.904
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.000
ENSOCUG00000028110 Oryctolagus cuniculus ENSOCUG00000028110 I 0.806
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.972
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.795
Srsf12 Mus musculus ENSMUSG00000054679 I 0.847
Srsf10 Mus musculus ENSMUSG00000028676 I 0.972
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.972
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.972
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.847
AAH46695 Xenopus laevis AAH46695 I 0.875
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.000
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.813
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.822
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.972
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.822
ENSTSYG00000009439 Tarsius syrichta ENSTSYG00000009439 I 0.817
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.000
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.795
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.803
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.877
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.000
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.000
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.000
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.753
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.822
SRSF12 Sorex araneus ENSSARG00000007795 I 0.000
SRSF12 Monodelphis domestica ENSMODG00000018282 I 0.795
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.904
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.808
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.944
CR293507.1 Danio rerio ENSDARG00000022415 I 0.808
ENSCSAVG00000005130 Ciona savignyi ENSCSAVG00000005130 I 0.000
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.932
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.000
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.903
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.972
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.875
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.833
ENSCJAG00000002933 Callithrix jacchus ENSCJAG00000002933 I 0.750
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.847
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.712
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.972
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.972
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.932
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.930
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.972
LOC100070965 Equus caballus ENSECAG00000019135 I 0.000
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.781
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.972
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.000
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.972
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.753
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.831
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.932
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.000
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.000
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.932
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.930
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.795
BX511012.1 Homo sapiens ENSG00000215699 I 0.972
SRSF12 Homo sapiens ENSG00000154548 I 0.847
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.789
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.708
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.904
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.822
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.847