myef2 (Xenopus tropicalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSXETG00000018412 T42919_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000039881 RRM 84 154
ENSXETP00000039881 RRM 225 294
ENSXETP00000039881 RRM 544 612

Links

Other RRM family RBPs
Other Xenopus tropicalis RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI34826 Xenopus laevis AAI34826 N 0.725
Hnrpm Rattus norvegicus ENSRNOG00000007921 N 0.744
Myef2 Rattus norvegicus ENSRNOG00000005258 N 0.905
MYEF2 Pteropus vampyrus ENSPVAG00000004102 N 0.710
HNRNPM Pan troglodytes ENSPTRG00000010424 N 0.744
MYEF2 Pan troglodytes ENSPTRG00000007042 N 0.910
ENSPPYG00000009506 Pongo pygmaeus ENSPPYG00000009506 N 0.744
ENSPPYG00000006452 Pongo pygmaeus ENSPPYG00000006452 N 0.910
MYEF2 Procavia capensis ENSPCAG00000016660 N 0.910
HNRNPM Procavia capensis ENSPCAG00000009678 N 0.735
HNRNPM Oryzias latipes ENSORLG00000005400 N 0.757
MYEF2 Oryzias latipes ENSORLG00000002730 N 0.876
MYEF2 Ochotona princeps ENSOPRG00000003919 N 0.795
MYEF2 Otolemur garnettii ENSOGAG00000010907 N 0.819
ENSOCUG00000024611 Oryctolagus cuniculus ENSOCUG00000024611 N 0.744
MYEF2 Oryctolagus cuniculus ENSOCUG00000013043 N 0.910
ENSOCUG00000000552 Oryctolagus cuniculus ENSOCUG00000000552 N 0.744
HNRNPM Sorex araneus ENSSARG00000000267 N 0.712
MYEF2 Sorex araneus ENSSARG00000003264 N 0.795
AAI08588 Xenopus laevis AAI08588 N 0.976
Ame_R017061 Ailuropoda melanoleuca Ame_R017061 N 0.744
Ame_R005511 Ailuropoda melanoleuca Ame_R005511 N 0.910
MYEF2 Vicugna pacos ENSVPAG00000004721 N 0.910
HNRNPM Tursiops truncatus ENSTTRG00000009769 N 0.744
MYEF2 Tursiops truncatus ENSTTRG00000008076 N 0.910
MYEF2 Tarsius syrichta ENSTSYG00000010575 N 0.843
MYEF2 Takifugu rubripes ENSTRUG00000016967 N 0.864
HNRNPM Takifugu rubripes ENSTRUG00000013783 N 0.738
HNRNPM Tetraodon nigroviridis ENSTNIG00000015530 N 0.733
MYEF2 Tetraodon nigroviridis ENSTNIG00000009526 N 0.863
MYEF2 Taeniopygia guttata ENSTGUG00000007130 N 0.905
HNRNPM Tupaia belangeri ENSTBEG00000008718 N 0.735
MYEF2 Spermophilus tridecemlineatus ENSSTOG00000007740 N 0.710
HNRNPM Sus scrofa ENSSSCG00000013602 N 0.744
MYEF2 Sus scrofa ENSSSCG00000004661 N 0.910
MYEF2 Ornithorhynchus anatinus ENSOANG00000007375 N 0.705
Hnrnpm Mus musculus ENSMUSG00000059208 N 0.739
Gm9833 Mus musculus ENSMUSG00000049230 N 0.724
MYEF2 Homo sapiens ENSG00000104177 N 0.910
HNRNPM Homo sapiens ENSG00000099783 N 0.744
HNRNPM Echinops telfairi ENSETEG00000019712 N 0.744
HNRNPM Equus caballus ENSECAG00000023868 N 0.744
LOC100070256 Equus caballus ENSECAG00000005741 N 0.910
ENSDORG00000015835 Dipodomys ordii ENSDORG00000015835 N 0.905
myef2 Danio rerio ENSDARG00000059398 N 0.857
HNRNPM Cavia porcellus ENSCPOG00000015182 N 0.744
MYEF2 Cavia porcellus ENSCPOG00000010584 N 0.863
HNRNPM Callithrix jacchus ENSCJAG00000010802 N 0.749
MYEF2 Callithrix jacchus ENSCJAG00000001875 N 0.910
HNRNPM Choloepus hoffmanni ENSCHOG00000013627 N 0.744
HNRNPM Canis familiaris ENSCAFG00000018524 N 0.744
MYEF2 Canis familiaris ENSCAFG00000014008 N 0.910
Q3SYX2_BOVIN Bos taurus ENSBTAG00000021039 N 0.744
A6QQP0_BOVIN Bos taurus ENSBTAG00000008771 N 0.910
HNRNPM Gasterosteus aculeatus ENSGACG00000010265 N 0.762
MYEF2 Gasterosteus aculeatus ENSGACG00000016759 N 0.862
Myef2 Mus musculus ENSMUSG00000027201 N 0.900
XM_001365870.1 Monodelphis domestica ENSMODG00000003801 N 0.754
MYEF2 Monodelphis domestica ENSMODG00000002744 N 0.829
MYEF2 Macaca mulatta ENSMMUG00000018834 N 0.910
HNRNPM Macaca mulatta ENSMMUG00000018806 N 0.744
MYEF2 Myotis lucifugus ENSMLUG00000006781 N 0.719
HNRNPM Myotis lucifugus ENSMLUG00000006696 N 0.739
HNRNPM Microcebus murinus ENSMICG00000002532 N 0.720
MYEF2 Meleagris gallopavo ENSMGAG00000006915 N 0.910
HNRNPM Meleagris gallopavo ENSMGAG00000000700 N 0.731
HNRNPM Loxodonta africana ENSLAFG00000013603 N 0.744
MYEF2 Loxodonta africana ENSLAFG00000012990 N 0.905
MYEF2 Gorilla gorilla ENSGGOG00000014968 N 0.910
HNRNPM Gorilla gorilla ENSGGOG00000003498 N 0.744
Q5ZHY2_CHICK Gallus gallus ENSGALG00000004905 N 0.910
Q5ZL80_CHICK Gallus gallus ENSGALG00000000377 N 0.741
MYEF2 Anolis carolinensis ENSACAG00000004806 N 0.919