GSVIVG00032361001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00032361001 T44766_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00032361001 RRM 95 165
GSVIVT00032361001 RRM 189 259

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK05280.1 Cannabis sativa PK05280.1 N 0.852
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.852
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.775
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.817
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.803
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.803
mgf001484m Mimulus guttatus mgf001484m N 0.796
mgf008267m Mimulus guttatus mgf008267m N 0.824
mgf009747m Mimulus guttatus mgf009747m N 0.761
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.852
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.775
GRMZM2G158462 Zea mays GRMZM2G158462 N 0.754
MDP0000218595 Malus x domestica MDP0000218595 N 0.852
MDP0000296631 Malus x domestica MDP0000296631 N 0.739
MDP0000299693 Malus x domestica MDP0000299693 N 0.739
MDP0000528470 Malus x domestica MDP0000528470 N 0.810
MDP0000919119 Malus x domestica MDP0000919119 N 0.852
ppa008913m Prunus persica ppa008913m N 0.859
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.824
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.866
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.859
PK28733.1 Cannabis sativa PK28733.1 N 0.775
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.789
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.775
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.754
BRADI3G42700 Brachypodium distachyon BRADI3G42700 N 0.746
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.831
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.831
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.817
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.754
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.824
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.866
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.831
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.796
SB02G011330 Sorghum bicolor Sb02g011330 N 0.817
SB07G024400 Sorghum bicolor Sb07g024400 N 0.775
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.810
30147.m013835 Ricinus communis 30147.m013835 N 0.859
ppa009286m Prunus persica ppa009286m N 0.824