Ame_R020475 (Ailuropoda melanoleuca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Ame_R020475 T55664_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R020475 RRM 126 193

Links

Other RRM family RBPs
Other Ailuropoda melanoleuca RBPs

72 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI23372 Xenopus laevis AAI23372 N 0.915
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.958
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.901
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.901
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.944
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.803
PPIE Sus scrofa ENSSSCG00000003664 N 0.958
PPIE Sorex araneus ENSSARG00000005703 N 0.958
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.958
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.958
PPIE Pan troglodytes ENSPTRG00000000577 N 0.958
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.985
PPIE Oryzias latipes ENSORLG00000017469 N 0.915
PPIE Otolemur garnettii ENSOGAG00000003620 N 0.783
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.958
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.930
Ppie Mus musculus ENSMUSG00000028651 N 0.958
ISCW002449 Ixodes scapularis ISCW002449 N 0.859
PHUM293600 Pediculus humanus PHUM293600 N 0.859
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.845
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.817
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.817
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.845
Smp_094810 Schistosoma mansoni Smp_094810 N 0.704
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.845
Sjc_0059010 Schistosoma japonicum Sjc_0059010 N 0.704
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.871
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.871
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.845
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.718
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.887
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.746
107863 Helobdella robusta 107863 N 0.789
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.704
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.761
PPIE Monodelphis domestica ENSMODG00000017659 N 0.944
PPIE Macaca mulatta ENSMMUG00000018869 N 0.958
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.817
PPIE Canis familiaris ENSCAFG00000003031 N 0.958
PPIE Anolis carolinensis ENSACAG00000002688 N 0.915
CRE28739 Caenorhabditis remanei CRE28739 N 0.718
CJA08769 Caenorhabditis japonica CJA08769 N 0.704
CBN02296 Caenorhabditis brenneri CBN02296 N 0.732
CBG00420 Caenorhabditis briggsae CBG00420 N 0.704
AGAP009810 Anopheles gambiae AGAP009810 N 0.704
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.838
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.775
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.845
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.845
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.845
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.746
LOAG_00807 Loa loa LOAG_00807 N 0.746
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.746
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.958
PPIE Cavia porcellus ENSCPOG00000007365 N 0.944
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.958
ENSMLUG00000006201 Myotis lucifugus ENSMLUG00000006201 N 0.718
PPIE Microcebus murinus ENSMICG00000016676 N 0.958
PPIE Macropus eugenii ENSMEUG00000005090 N 0.778
PPIE Loxodonta africana ENSLAFG00000028312 N 0.958
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.958
PPIE Gallus gallus ENSGALG00000013383 N 0.944
PPIE Gasterosteus aculeatus ENSGACG00000007165 N 0.901
PPIE Homo sapiens ENSG00000084072 N 0.958
PPIE Felis catus ENSFCAG00000006027 N 0.915
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.803
LOC100054282 Equus caballus ENSECAG00000024285 N 0.958
LOC100054084 Equus caballus ENSECAG00000008955 N 0.958
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.958
ppie Danio rerio ENSDARG00000059270 N 0.915
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.775
Bm1_52100 Brugia malayi Bm1_52100 N 0.746