FUBP3 (Cavia porcellus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCPOG00000010315 T18575_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000009264 KH 79 141
ENSCPOP00000009264 KH 164 228
ENSCPOP00000009264 KH 255 317
ENSCPOP00000009264 KH 356 421

Links

Other KH family RBPs
Other Cavia porcellus RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.961
AAH44277 Xenopus laevis AAH44277 I 0.760
AAH60400 Xenopus laevis AAH60400 N 0.911
AAH70981 Xenopus laevis AAH70981 I 0.767
AAI69815 Xenopus laevis AAI69815 I 0.767
AAN77161 Xenopus laevis AAN77161 I 0.752
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.965
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.795
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.837
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.758
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.764
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.802
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.957
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.798
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.798
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.764
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.734
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.798
Fubp1 Mus musculus ENSMUSG00000028034 I 0.795
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.802
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.798
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.764
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.802
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.795
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.777
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.798
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.798
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.798
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.775
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.798
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.798
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.802
FUBP1 Equus caballus ENSECAG00000010867 I 0.798
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.798
fubp1 Danio rerio ENSDARG00000029248 I 0.760
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.795
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.798
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.798
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.798
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.795
FUBP1 Homo sapiens ENSG00000162613 I 0.802
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.798
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.798
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.961
FUBP3 Homo sapiens ENSG00000107164 N 0.957
FUBP3 Sus scrofa ENSSSCG00000005702 N 0.856
FUBP3 Felis catus ENSFCAG00000005113 N 0.977
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.833
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.798
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.922
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.825
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.794
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.946
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.926
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.926
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.977
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.938
Fubp3 Mus musculus ENSMUSG00000026843 N 0.953
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.934
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.965
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.833
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.973
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.957
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.969
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.798
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.957
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.837
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.938
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.891
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.957
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.957
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.794
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.702
LOC100069755 Equus caballus ENSECAG00000011500 N 0.922
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.961
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.798
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.792
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.926