ACLA_045660 (Aspergillus clavatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADACLAG00004652 T33380_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADACLAP00004551 RRM 240 310

Links

Other RRM family RBPs
Other Aspergillus clavatus RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.901
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.958
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.718
An04g00680 Aspergillus niger CADANGAG00003776 N 0.930
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.873
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.901
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.789
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.930
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.718
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.803
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.761
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.831
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.831
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.718
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.704
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.718
estExt_Genewise1.C_170171 Neurospora tetrasperma estExt_Genewise1.C_170171 N 0.704
estExt_Genewise1Plus.C_100354 Neurospora discreta estExt_Genewise1Plus.C_100354 N 0.704
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.789
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.732
eu2.Lbscf0011g04470 Laccaria bicolor eu2.Lbscf0011g04470 N 0.718
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.732
e_gw1.11.592.1 Nectria haematococca e_gw1.11.592.1 N 0.732
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.789
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.718
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.775
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.901
fgeneshTM_pg.1_#_1063 Tremella mesenterica fgeneshTM_pg.1_#_1063 N 0.704
FGSG_04392 Fusarium graminearum FGSG_04392 N 0.718
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.775
gw1.11.214.1 Batrachochytrium dendrobatidis gw1.11.214.1 N 0.746
gw1.11.934.1 Heterobasidion annosum gw1.11.934.1 N 0.746
MCYG_01275 Microsporum canis MCYG_01275 N 0.817
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.817
NCU08518 Neurospora crassa NCU08518 N 0.704
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.972
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.817
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.887
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.901
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.718
SS1G_03893 Sclerotinia sclerotiorum SS1G_03893 N 0.704
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.789
TERG_07689 Trichophyton rubrum TERG_07689 N 0.789
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.789
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.789
UREG_05625 Uncinocarpus reesii UREG_05625 N 0.775
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.732