CELF3 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000002630 T40097_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000003278 RRM 9 54
ENSORLP00000003278 RRM 97 165
ENSORLP00000003278 RRM 395 465

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSGGOG00000011507 Gorilla gorilla ENSGGOG00000011507 N 0.000
ENSLAFG00000028909 Loxodonta africana ENSLAFG00000028909 N 0.000
Q5ZKS1_CHICK Gallus gallus ENSGALG00000009677 N 0.000
Ssb Dipodomys ordii ENSDORG00000005543 N 0.000
SSB Erinaceus europaeus ENSEEUG00000008077 N 0.000
SSB Homo sapiens ENSG00000138385 N 0.000
SSB Myotis lucifugus ENSMLUG00000016316 N 0.000
Ssb Mus musculus ENSMUSG00000068882 N 0.000
SSB Spermophilus tridecemlineatus ENSSTOG00000008416 N 0.000