CELF3 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000002630 T40097_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000003278 RRM 9 54
ENSORLP00000003278 RRM 97 165
ENSORLP00000003278 RRM 395 465

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6H776_BOVIN Bos taurus ENSBTAG00000004940 I 0.713
AAA81375 Xenopus laevis AAA81375 I 0.810
AAH46942 Xenopus laevis AAH46942 I 0.801
AAH57704 Xenopus laevis AAH57704 I 0.810
AAH72134 Xenopus laevis AAH72134 I 0.810
ACH69785 Xenopus laevis ACH69785 I 0.730
Ame_R007421 Ailuropoda melanoleuca Ame_R007421 I 0.787
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.711
B7NZE2_RABIT Oryctolagus cuniculus ENSOCUG00000003551 I 0.787
BRUNOL5 Homo sapiens ENSG00000161082 D 0.701
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.777
CELF3 Monodelphis domestica ENSMODG00000018897 I 0.787
CELF3 Pteropus vampyrus ENSPVAG00000015012 N 0.860
CELF3 Pan troglodytes ENSPTRG00000001293 I 0.787
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.791
CELF3 Oryzias latipes ENSORLG00000010447 I 0.753
Celf3 Mus musculus ENSMUSG00000028137 I 0.787
CELF3 Ochotona princeps ENSOPRG00000011130 I 0.758
CELF3 Procavia capensis ENSPCAG00000001623 I 0.768
CELF3 Loxodonta africana ENSLAFG00000030147 I 0.787
CELF3 Canis familiaris ENSCAFG00000012794 I 0.787
CELF3 Callithrix jacchus ENSCJAG00000007857 I 0.787
CELF3 Cavia porcellus ENSCPOG00000003539 I 0.787
celf3 Danio rerio ENSDARG00000034668 I 0.825
CELF3 Equus caballus ENSECAG00000020365 I 0.787
CELF3 Homo sapiens ENSG00000159409 I 0.787
CELF3 Danio rerio ENSDARG00000006983 I 0.786
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.853
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.796
CELF3 Sus scrofa ENSSSCG00000006618 I 0.773
CELF3_BOVIN Bos taurus ENSBTAG00000019131 I 0.787
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.725
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.730
Celf4 Mus musculus ENSMUSG00000024268 I 0.725
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.730
CELF4 Oryzias latipes ENSORLG00000008913 I 0.716
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.770
CELF5 Oryzias latipes ENSORLG00000004600 I 0.716
CELF5 Macropus eugenii ENSMEUG00000013080 I 0.806
celf5 Danio rerio ENSDARG00000071375 I 0.720
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.720
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.725
D4A916_RAT Rattus norvegicus ENSRNOG00000020875 I 0.787
ENSGGOG00000021973 Gorilla gorilla ENSGGOG00000021973 I 0.787
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.801
Q91579 Xenopus laevis Q91579 I 0.810