CELF4 (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000008752 T37464_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.768
BRUNOL4
M004_0.6 		Homo sapiens KGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00004 		0.735
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.720
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000011557 RRM 53 108
ENSGACP00000011557 RRM 141 209
ENSGACP00000011557 RRM 442 512

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF4 Oryzias latipes ENSORLG00000008913 I 0.882
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.853
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.848
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.844
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.844
Celf4 Mus musculus ENSMUSG00000024268 I 0.839
CELF4 Tetraodon nigroviridis ENSTNIG00000010679 I 0.804
CELF5 Macropus eugenii ENSMEUG00000013080 I 0.801
celf5 Danio rerio ENSDARG00000071375 I 0.787
A6H776_BOVIN Bos taurus ENSBTAG00000004940 I 0.786
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.782
CELF5 Oryzias latipes ENSORLG00000004600 I 0.777
CELF3 Oryzias latipes ENSORLG00000002630 I 0.770
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.768
BRUNOL5 Homo sapiens ENSG00000161082 D 0.768
ACH69785 Xenopus laevis ACH69785 I 0.763
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.754
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.754
estExt_Genewise1Plus.C_6380019 Capitella teleta estExt_Genewise1Plus.C_6380019 I 0.754
CELF6 Meleagris gallopavo ENSMGAG00000001804 I 0.752
ACH69784 Xenopus laevis ACH69784 I 0.752
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.749
celf3 Danio rerio ENSDARG00000034668 I 0.749
AAH46942 Xenopus laevis AAH46942 I 0.749
ENSPPYG00000009118 Pongo pygmaeus ENSPPYG00000009118 I 0.748
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.744
AAA81375 Xenopus laevis AAA81375 I 0.744
AAH57704 Xenopus laevis AAH57704 I 0.744
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.744
AAH72134 Xenopus laevis AAH72134 I 0.744
Q91579 Xenopus laevis Q91579 I 0.744
CELF4 Gorilla gorilla ENSGGOG00000013920 I 0.743
LOC100386457 Callithrix jacchus ENSCJAG00000021135 I 0.743
CELF4 Pteropus vampyrus ENSPVAG00000009204 I 0.743
BRUNOL4 Homo sapiens ENSG00000101489 D 0.743
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.739
CELF4 Tursiops truncatus ENSTTRG00000016826 I 0.738
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.730
Celf6 Mus musculus ENSMUSG00000032297 I 0.725
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.725
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.720
CELF6 Felis catus ENSFCAG00000016249 I 0.720
BRUNOL6 Homo sapiens ENSG00000140488 D 0.720
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.720
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.720
HEXA Macaca mulatta ENSMMUG00000010687 I 0.720
CELF6 Bos taurus ENSBTAG00000014092 I 0.720
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.720
CELF6 Sus scrofa ENSSSCG00000001928 I 0.720
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.719
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.717
ENSPPYG00000006615 Pongo pygmaeus ENSPPYG00000006615 I 0.716
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.711
CRE09771 Caenorhabditis remanei CRE09771 I 0.705
CELF3 Danio rerio ENSDARG00000006983 I 0.705
CBG15358 Caenorhabditis briggsae CBG15358 I 0.705
Bm1_27610 Brugia malayi Bm1_27610 I 0.701