CELF5 (Macropus eugenii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMEUG00000013080 T38253_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
BRUNOL5
M157_0.6 		Homo sapiens UGUGUKK RNAcompete
Ray et al.(2013)
RNCMPT00166 		0.805
BRUNOL6
M178_0.6 		Homo sapiens UGUGDKG RNAcompete
Ray et al.(2013)
RNCMPT00187 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMEUP00000011935 RRM 46 86
ENSMEUP00000011935 RRM 134 202
ENSMEUP00000011935 RRM 403 473

Links

Other RRM family RBPs
Other Macropus eugenii RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R011948 Ailuropoda melanoleuca Ame_R011948 I 0.810
CELF3 Oryzias latipes ENSORLG00000002630 I 0.806
CELF4 Gasterosteus aculeatus ENSGACG00000008752 I 0.801
BRUNOL5 Homo sapiens ENSG00000161082 D 0.801
CELF5 Pan troglodytes ENSPTRG00000010259 I 0.787
ACH69785 Xenopus laevis ACH69785 I 0.777
CELF5 Oryzias latipes ENSORLG00000004600 I 0.773
celf5 Danio rerio ENSDARG00000071375 I 0.768
celf5 Xenopus tropicalis ENSXETG00000014344 I 0.768
CELF3 Pteropus vampyrus ENSPVAG00000015012 N 0.765
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.758
CELF4 Oryctolagus cuniculus ENSOCUG00000024790 I 0.758
A6H776_BOVIN Bos taurus ENSBTAG00000004940 I 0.754
Celf4 Mus musculus ENSMUSG00000024268 I 0.754
celf4 Xenopus tropicalis ENSXETG00000020486 I 0.754
CELF4 Oryzias latipes ENSORLG00000008913 I 0.744
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.730
CELF4 Takifugu rubripes ENSTRUG00000015481 I 0.730
CELF3 Tetraodon nigroviridis ENSTNIG00000008062 I 0.730
CELF3 Gasterosteus aculeatus ENSGACG00000011707 I 0.730
CELF3 Takifugu rubripes ENSTRUG00000014225 I 0.716
AAH57704 Xenopus laevis AAH57704 I 0.711
Q91579 Xenopus laevis Q91579 I 0.711
AAH72134 Xenopus laevis AAH72134 I 0.711
AAA81375 Xenopus laevis AAA81375 I 0.711
Brunol6 Rattus norvegicus ENSRNOG00000010817 I 0.706
Celf6 Mus musculus ENSMUSG00000032297 I 0.706
CELF3 Gasterosteus aculeatus ENSGACG00000003274 I 0.706
CELF6 Loxodonta africana ENSLAFG00000020985 I 0.703
CELF6 Felis catus ENSFCAG00000016249 I 0.701
CELF6 Gorilla gorilla ENSGGOG00000015463 I 0.701
BRUNOL6 Homo sapiens ENSG00000140488 D 0.701
HEXA Macaca mulatta ENSMMUG00000010687 I 0.701
CELF6 Sus scrofa ENSSSCG00000001928 I 0.701
CELF6 Pteropus vampyrus ENSPVAG00000006406 I 0.701
Ame_R007822 Ailuropoda melanoleuca Ame_R007822 I 0.701
AAH46942 Xenopus laevis AAH46942 I 0.701
CELF6 Bos taurus ENSBTAG00000014092 I 0.701
Q7ZWM3 Xenopus laevis Q7ZWM3 I 0.701
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.701
Minc16232 Meloidogyne incognita Minc16232 N 0.701
CELF3 Danio rerio ENSDARG00000006983 I 0.700