NCBP2 (Tursiops truncatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTTRG00000013908 T42656_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000013185 RRM 42 112

Links

Other RRM family RBPs
Other Tursiops truncatus RBPs

161 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
91084 Helobdella robusta 91084 N 0.803
AAH72902 Xenopus laevis AAH72902 N 0.873
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.887
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.986
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.732
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.859
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.831
Bm1_02935 Brugia malayi Bm1_02935 N 0.817
CBG22194 Caenorhabditis briggsae CBG22194 N 0.000
CBN14593 Caenorhabditis brenneri CBN14593 N 0.000
Cbp20 Drosophila melanogaster FBgn0022943 N 0.775
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.803
CRE20447 Caenorhabditis remanei CRE20447 N 0.000
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.817
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.972
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.789
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.789
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.761
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.958
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.972
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.845
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.930
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.958
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.958
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.986
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.986
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.986
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.972
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.761
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.761
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.817
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.817
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.775
GD19204 Drosophila simulans FBgn0190709 N 0.775
GE25514 Drosophila yakuba FBgn0242580 N 0.775
GF16759 Drosophila ananassae FBgn0093780 N 0.789
GG22670 Drosophila erecta FBgn0114835 N 0.789
GH15101 Drosophila grimshawi FBgn0122576 N 0.789
GI23717 Drosophila mojavensis FBgn0146442 N 0.789
GJ18756 Drosophila virilis FBgn0205908 N 0.761
GJ23276 Drosophila virilis FBgn0210378 N 0.789
GK11244 Drosophila willistoni FBgn0213255 N 0.775
GL12592 Drosophila persimilis FBgn0150198 N 0.775
GM15280 Drosophila sechellia FBgn0170200 N 0.775
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.845
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.845
LOAG_03270 Loa loa LOAG_03270 N 0.831
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.986
Minc02990 Meloidogyne incognita Minc02990 N 0.704
Minc06129 Meloidogyne incognita Minc06129 N 0.704
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.915
ncbp-2 Caenorhabditis elegans F26A3.2 N 0.000
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.958
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.972
NCBP2 Gallus gallus ENSGALG00000006843 N 0.930
NCBP2 Homo sapiens ENSG00000114503 N 0.986
NCBP2 Equus caballus ENSECAG00000016153 N 0.986
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.986
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.972
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.986
ncbp2 Danio rerio ENSDARG00000014898 N 0.845
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.887
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.986
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.972
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.986
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.944
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.986
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.986
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.986
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.831
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.986
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.972
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.873
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.859
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.915
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.817
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.817
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.831
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.986
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.845
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.803
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.817
P52299 Xenopus laevis P52299 N 0.873
PHUM535920 Pediculus humanus PHUM535920 N 0.873
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.986
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.732
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.831
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.972
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.944
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.845
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.817