Pc13g04070 (Penicillium chrysogenum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pc13g04070 T57972_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pc13g04070.t1 RRM 52 122

Links

Other RRM family RBPs
Other Penicillium chrysogenum RBPs

92 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.944
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.972
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.732
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.000
An12g03930 Aspergillus niger CADANGAG00009835 N 0.986
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.732
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.972
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.972
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.000
cbc2 Schizosaccharomyces pombe SPBC13A2.01c N 0.775
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.972
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.972
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.944
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.761
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.732
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.000
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.000
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.000
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.718
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.704
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.000
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.000
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.000
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.000
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.000
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.000
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.944
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.727
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.000
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.944
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.000
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.958
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.944
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.915
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.930
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.915
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.944
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.746
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.718
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.915
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.986
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.803
FGSG_05488 Fusarium graminearum FGSG_05488 N 0.958
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.944
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.761
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.930
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.915
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.732
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.732
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.732
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.803
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.714
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.972
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.000
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.000
MCYG_04468 Microsporum canis MCYG_04468 N 0.972
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.915
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.972
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.704
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.732
NCBP2 Equus caballus ENSECAG00000016153 N 0.000
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.000
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.704
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.000
NCBP2 Gallus gallus ENSGALG00000006843 N 0.704
NCBP2 Homo sapiens ENSG00000114503 N 0.000
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.000
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.000
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.761
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.000
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.704
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.000
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.000
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.000
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.000
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.000
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.000
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.000
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.000
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.000
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.718
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.704
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.000
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.718
NCU00210 Neurospora crassa NCU00210 N 0.915
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.972
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.972
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.930
PGTG_01720 Puccinia graminis PGTG_01720 N 0.746
PHUM535920 Pediculus humanus PHUM535920 N 0.746
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.000
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.986
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.944
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.803
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.944
SOCG_01831 Schizosaccharomyces octosporus SOCG_01831 N 0.789
SPOG_01217 Schizosaccharomyces cryophilus SPOG_01217 N 0.803
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.831
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.972
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.972
TERG_03424 Trichophyton rubrum TERG_03424 N 0.972
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.958
VDAG_05874 Verticillium dahliae VDAG_05874 N 0.930
VDBG_06810 Verticillium albo atrum VDBG_06810 N 0.930
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.000
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.000
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.704