AAI34826 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAI34826 T59631_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAI34826 RRM 70 140
AAI34826 RRM 240 309
AAI34826 RRM 664 732

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6QQP0_BOVIN Bos taurus ENSBTAG00000008771 N 0.730
AAI08588 Xenopus laevis AAI08588 N 0.711
Ame_R005511 Ailuropoda melanoleuca Ame_R005511 N 0.730
Ame_R017061 Ailuropoda melanoleuca Ame_R017061 N 0.862
ENSDORG00000015835 Dipodomys ordii ENSDORG00000015835 N 0.725
ENSOCUG00000000552 Oryctolagus cuniculus ENSOCUG00000000552 N 0.862
ENSOCUG00000024611 Oryctolagus cuniculus ENSOCUG00000024611 N 0.862
ENSPPYG00000006452 Pongo pygmaeus ENSPPYG00000006452 N 0.730
ENSPPYG00000009506 Pongo pygmaeus ENSPPYG00000009506 N 0.862
ENSRNOG00000024645 Rattus norvegicus ENSRNOG00000024645 N 0.752
HNRNPM Sus scrofa ENSSSCG00000013602 N 0.862
HNRNPM Myotis lucifugus ENSMLUG00000006696 N 0.857
HNRNPM Macaca mulatta ENSMMUG00000018806 N 0.862
Hnrnpm Mus musculus ENSMUSG00000059208 N 0.857
hnrnpm Xenopus tropicalis ENSXETG00000001777 N 0.914
HNRNPM Tursiops truncatus ENSTTRG00000009769 N 0.862
HNRNPM Otolemur garnettii ENSOGAG00000003234 N 0.757
HNRNPM Ochotona princeps ENSOPRG00000001943 N 0.820
HNRNPM Oryzias latipes ENSORLG00000005400 N 0.768
HNRNPM Procavia capensis ENSPCAG00000009678 N 0.862
HNRNPM Takifugu rubripes ENSTRUG00000013783 N 0.758
HNRNPM Tetraodon nigroviridis ENSTNIG00000015530 N 0.758
HNRNPM Pan troglodytes ENSPTRG00000010424 N 0.862
HNRNPM Tupaia belangeri ENSTBEG00000008718 N 0.848
HNRNPM Sorex araneus ENSSARG00000000267 N 0.829
HNRNPM Spermophilus tridecemlineatus ENSSTOG00000008112 N 0.790
HNRNPM Microcebus murinus ENSMICG00000002532 N 0.838
HNRNPM Meleagris gallopavo ENSMGAG00000000700 N 0.840
HNRNPM Equus caballus ENSECAG00000023868 N 0.862
HNRNPM Gasterosteus aculeatus ENSGACG00000010265 N 0.768
HNRNPM Cavia porcellus ENSCPOG00000015182 N 0.862
HNRNPM Felis catus ENSFCAG00000015218 N 0.768
HNRNPM Choloepus hoffmanni ENSCHOG00000013627 N 0.862
HNRNPM Dasypus novemcinctus ENSDNOG00000012157 N 0.801
HNRNPM Gorilla gorilla ENSGGOG00000003498 N 0.862
HNRNPM Echinops telfairi ENSETEG00000019712 N 0.862
HNRNPM Canis familiaris ENSCAFG00000018524 N 0.862
HNRNPM Homo sapiens ENSG00000099783 N 0.862
HNRNPM Loxodonta africana ENSLAFG00000013603 N 0.862
HNRNPM Macropus eugenii ENSMEUG00000004789 N 0.801
HNRNPM Callithrix jacchus ENSCJAG00000010802 N 0.862
Hnrpm Rattus norvegicus ENSRNOG00000007921 N 0.862
LOC100070256 Equus caballus ENSECAG00000005741 N 0.730
myef2 Danio rerio ENSDARG00000059398 N 0.720
MYEF2 Taeniopygia guttata ENSTGUG00000007130 N 0.730
MYEF2 Tetraodon nigroviridis ENSTNIG00000009526 N 0.703
MYEF2 Callithrix jacchus ENSCJAG00000001875 N 0.725
MYEF2 Takifugu rubripes ENSTRUG00000016967 N 0.715
MYEF2 Tursiops truncatus ENSTTRG00000008076 N 0.730
MYEF2 Canis familiaris ENSCAFG00000014008 N 0.730
myef2 Xenopus tropicalis ENSXETG00000018412 N 0.725
MYEF2 Sus scrofa ENSSSCG00000004661 N 0.720
Myef2 Rattus norvegicus ENSRNOG00000005258 N 0.735
MYEF2 Loxodonta africana ENSLAFG00000012990 N 0.735
MYEF2 Macaca mulatta ENSMMUG00000018834 N 0.730
MYEF2 Vicugna pacos ENSVPAG00000004721 N 0.730
Myef2 Mus musculus ENSMUSG00000027201 N 0.730
MYEF2 Gorilla gorilla ENSGGOG00000014968 N 0.725
MYEF2 Oryctolagus cuniculus ENSOCUG00000013043 N 0.730
MYEF2 Meleagris gallopavo ENSMGAG00000006915 N 0.730
MYEF2 Pan troglodytes ENSPTRG00000007042 N 0.730
MYEF2 Gasterosteus aculeatus ENSGACG00000016759 N 0.725
MYEF2 Oryzias latipes ENSORLG00000002730 N 0.720
MYEF2 Homo sapiens ENSG00000104177 N 0.730
MYEF2 Procavia capensis ENSPCAG00000016660 N 0.730
MYEF2 Anolis carolinensis ENSACAG00000004806 N 0.725
Q3SYX2_BOVIN Bos taurus ENSBTAG00000021039 N 0.862
Q5ZHY2_CHICK Gallus gallus ENSGALG00000004905 N 0.730
Q5ZL80_CHICK Gallus gallus ENSGALG00000000377 N 0.853
XM_001365870.1 Monodelphis domestica ENSMODG00000003801 N 0.862