AT5G15270 (Arabidopsis thaliana)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AT5G15270-TAIR-G T18109_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT5G15270.1-P KH 51 110
AT5G15270.1-P KH 148 215
AT5G15270.1-P KH 286 340
AT5G15270.1-P KH 371 438
AT5G15270.2-P KH 51 110
AT5G15270.2-P KH 148 215
AT5G15270.2-P KH 286 340
AT5G15270.2-P KH 371 438

Links

Other KH family RBPs
Other Arabidopsis thaliana RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.984
PK16782.1 Cannabis sativa PK16782.1 N 0.746
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.786
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.740
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.766
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.701
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.759
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.720
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.747
MDP0000573228 Malus x domestica MDP0000573228 N 0.746
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.782
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.782
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.782
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.782
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.746
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.739
mgf011898m Mimulus guttatus mgf011898m N 0.715
mgf007265m Mimulus guttatus mgf007265m N 0.715
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.738
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.758
ppa003758m Prunus persica ppa003758m N 0.762
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.731