ppa003758m (Prunus persica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ppa003758m T21970_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa003758m KH 46 103
ppa003758m KH 144 211
ppa003758m KH 286 341
ppa003758m KH 372 439

Links

Other KH family RBPs
Other Prunus persica RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000573228 Malus x domestica MDP0000573228 N 0.933
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.856
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.856
PK16782.1 Cannabis sativa PK16782.1 N 0.856
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.856
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.856
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.853
mgf007265m Mimulus guttatus mgf007265m N 0.849
mgf011898m Mimulus guttatus mgf011898m N 0.849
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.848
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.839
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.837
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.837
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.836
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.829
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.821
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.818
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.817
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.807
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.803
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.766
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.766
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.762
GRMZM2G126120 Zea mays GRMZM2G126120 N 0.710
GRMZM2G084540 Zea mays GRMZM2G084540 N 0.710
BRADI1G61230 Brachypodium distachyon BRADI1G61230 N 0.709
cassava12022.valid.m1 Manihot esculenta cassava12022.valid.m1 N 0.704
cassava12023.valid.m1 Manihot esculenta cassava12023.valid.m1 N 0.704