Glyma13g05520.1 (Glycine max)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Glyma13g05520.1 T21201_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma13g05520.1 KH 43 103
Glyma13g05520.1 KH 140 207
Glyma13g05520.1 KH 284 336
Glyma13g05520.1 KH 370 437

Links

Other KH family RBPs
Other Glycine max RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.941
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.846
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.846
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.843
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.819
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.819
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.806
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.806
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.806
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.806
ppa003758m Prunus persica ppa003758m N 0.803
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.800
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.799
mgf011898m Mimulus guttatus mgf011898m N 0.788
mgf007265m Mimulus guttatus mgf007265m N 0.788
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.787
MDP0000573228 Malus x domestica MDP0000573228 N 0.786
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.783
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.772
PK16782.1 Cannabis sativa PK16782.1 N 0.768
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.733
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.705
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.701