MDP0000573228 (Malus x domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 MDP0000573228 T21859_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000573228 KH 47 104
MDP0000573228 KH 152 219
MDP0000573228 KH 294 353
MDP0000573228 KH 380 447

Links

Other KH family RBPs
Other Malus x domestica RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa003758m Prunus persica ppa003758m N 0.933
PK16782.1 Cannabis sativa PK16782.1 N 0.850
mgf007265m Mimulus guttatus mgf007265m N 0.835
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.835
mgf011898m Mimulus guttatus mgf011898m N 0.835
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.835
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.831
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.827
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.827
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.827
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.827
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.825
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.824
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.824
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.816
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.802
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.802
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.796
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.792
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.786
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.773
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.750
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.746
cassava12023.valid.m1 Manihot esculenta cassava12023.valid.m1 N 0.703
cassava12022.valid.m1 Manihot esculenta cassava12022.valid.m1 N 0.703
GRMZM2G126120 Zea mays GRMZM2G126120 N 0.703
GRMZM2G084540 Zea mays GRMZM2G084540 N 0.703