Glyma18g49600.1 (Glycine max)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Glyma18g49600.1 T21222_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma18g49600.1 KH 45 103
Glyma18g49600.1 KH 141 208
Glyma18g49600.1 KH 280 335
Glyma18g49600.1 KH 366 432

Links

Other KH family RBPs
Other Glycine max RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.984
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.917
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.849
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.846
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.845
ppa003758m Prunus persica ppa003758m N 0.837
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.831
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.825
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.825
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.825
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.825
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.825
MDP0000573228 Malus x domestica MDP0000573228 N 0.824
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.819
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.813
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.797
PK16782.1 Cannabis sativa PK16782.1 N 0.793
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.785
mgf007265m Mimulus guttatus mgf007265m N 0.778
mgf011898m Mimulus guttatus mgf011898m N 0.778
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.767
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.766
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.762
cassava12022.valid.m1 Manihot esculenta cassava12022.valid.m1 N 0.722
cassava12023.valid.m1 Manihot esculenta cassava12023.valid.m1 N 0.722
B9HXY8_POPTR Populus trichocarpa POPTR_0010s17430 N 0.709
B9HI86_POPTR Populus trichocarpa POPTR_0008s08810 N 0.709