Medtr7g010360 (Medicago truncatula)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Medtr7g010360 T21432_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr7g010360.1 KH 50 107
Medtr7g010360.1 KH 154 221
Medtr7g010360.1 KH 297 352
Medtr7g010360.1 KH 383 450

Links

Other KH family RBPs
Other Medicago truncatula RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.854
ppa003758m Prunus persica ppa003758m N 0.848
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.845
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.845
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.837
Glyma19g02840.1 Glycine max Glyma19g02840.1 N 0.831
MDP0000573228 Malus x domestica MDP0000573228 N 0.831
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.807
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.805
PK16782.1 Cannabis sativa PK16782.1 N 0.800
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.799
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.797
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.796
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.796
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.796
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.796
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.796
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.789
mgf011898m Mimulus guttatus mgf011898m N 0.781
mgf007265m Mimulus guttatus mgf007265m N 0.781
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.754
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.750
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.746