Glyma19g02840.1 (Glycine max)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Glyma19g02840.1 T21224_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma19g02840.1 KH 43 103
Glyma19g02840.1 KH 140 207
Glyma19g02840.1 KH 284 340
Glyma19g02840.1 KH 370 437

Links

Other KH family RBPs
Other Glycine max RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma13g05520.1 Glycine max Glyma13g05520.1 N 0.941
LjSGA_002278.2 Lotus japonicus LjSGA_002278.2 N 0.882
chr1.CM0141.280.nc Lotus japonicus chr1.CM0141.280.nc N 0.870
Medtr6g013130 Medicago truncatula Medtr6g013130 N 0.866
Glyma09g37070.1 Glycine max Glyma09g37070.1 N 0.846
Glyma18g49600.1 Glycine max Glyma18g49600.1 N 0.846
ppa003758m Prunus persica ppa003758m N 0.839
GSVIVG00011439001 Vitis vinifera GSVIVG00011439001 N 0.835
Medtr7g010360 Medicago truncatula Medtr7g010360 N 0.831
MDP0000573228 Malus x domestica MDP0000573228 N 0.825
cassava42739.valid.m1 Manihot esculenta cassava42739.valid.m1 N 0.815
cassava42740.valid.m1 Manihot esculenta cassava42740.valid.m1 N 0.815
cassava42742.valid.m1 Manihot esculenta cassava42742.valid.m1 N 0.815
cassava42741.valid.m1 Manihot esculenta cassava42741.valid.m1 N 0.815
Cucsa.158200 Cucumis sativus Cucsa.158200 N 0.815
mgf011898m Mimulus guttatus mgf011898m N 0.800
mgf007265m Mimulus guttatus mgf007265m N 0.800
A9PE42_POPTR Populus trichocarpa POPTR_0017s12170 N 0.799
PK16782.1 Cannabis sativa PK16782.1 N 0.799
B9H0D1_POPTR Populus trichocarpa POPTR_0004s12220 N 0.791
GSVIVG00019958001 Vitis vinifera GSVIVG00019958001 N 0.766
XM_002871611.1 Arabidopsis lyrata fgenesh2_kg.6__1509__AT5G15270.1 N 0.744
AT5G15270 Arabidopsis thaliana AT5G15270-TAIR-G N 0.740
GRMZM2G126120 Zea mays GRMZM2G126120 N 0.706
BRADI1G61230 Brachypodium distachyon BRADI1G61230 N 0.702