FUBP3 (Pan troglodytes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSPTRG00000021474 T19386_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000036744 KH 79 141
ENSPTRP00000036744 KH 164 228
ENSPTRP00000036744 KH 255 317
ENSPTRP00000036744 KH 356 421
ENSPTRP00000042122 KH 79 141
ENSPTRP00000042122 KH 164 228
ENSPTRP00000042122 KH 255 317
ENSPTRP00000042122 KH 356 421
ENSPTRP00000048786 KH 79 141
ENSPTRP00000048786 KH 164 228
ENSPTRP00000048786 KH 255 314
ENSPTRP00000048787 KH 19 81
ENSPTRP00000048787 KH 104 168
ENSPTRP00000048787 KH 195 255

Links

Other KH family RBPs
Other Pan troglodytes RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.973
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.792
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.791
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.795
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.953
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.996
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.795
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.969
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.795
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.957
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.795
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.795
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.840
fubp1 Danio rerio ENSDARG00000029248 I 0.764
FUBP1 Dasypus novemcinctus ENSDNOG00000013200 N 0.744
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.957
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.795
FUBP1 Echinops telfairi ENSETEG00000000948 N 0.744
FUBP1 Equus caballus ENSECAG00000010867 I 0.795
LOC100069755 Equus caballus ENSECAG00000011500 N 0.930
FUBP3 Erinaceus europaeus ENSEEUG00000000550 N 0.723
FUBP3 Felis catus ENSFCAG00000005113 N 0.965
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.792
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.934
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.802
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.758
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 1.000
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.798
FUBP3 Homo sapiens ENSG00000107164 N 1.000
FUBP1 Homo sapiens ENSG00000162613 I 0.798
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.795
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.973
FUBP3 Macaca mulatta ENSMMUG00000008249 N 1.000
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.798
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.795
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.934
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.981
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.942
Fubp3 Mus musculus ENSMUSG00000026843 N 0.961
Fubp1 Mus musculus ENSMUSG00000028034 I 0.791
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.899
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.795
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.965
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.730
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.795
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.938
FUBP3 Oryctolagus cuniculus ENSOCUG00000006183 N 0.841
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.761
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.767
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.805
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.837
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.829
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.795
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.798
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 1.000
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.798
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.795
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.946
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.973
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.965
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.791
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.795
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.795
FUBP3 Sus scrofa ENSSSCG00000005702 N 0.856
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.934
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.777
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.764
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.825
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.805
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.795
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.833
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.813
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.795
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.795
AAI69815 Xenopus laevis AAI69815 I 0.764
AAH70981 Xenopus laevis AAH70981 I 0.764
AAH60400 Xenopus laevis AAH60400 N 0.903
AAH44277 Xenopus laevis AAH44277 I 0.756
AAN77161 Xenopus laevis AAN77161 I 0.748
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.771
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.914