CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP3
(
Pan troglodytes
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSPTRG00000021474
T19386_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000036744
KH
79
141
TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL
ENSPTRP00000036744
KH
164
228
IQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMV
ENSPTRP00000036744
KH
255
317
SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHII
ENSPTRP00000036744
KH
356
421
EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLI
ENSPTRP00000042122
KH
79
141
TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL
ENSPTRP00000042122
KH
164
228
IQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMV
ENSPTRP00000042122
KH
255
317
SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHII
ENSPTRP00000042122
KH
356
421
EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQLI
ENSPTRP00000048786
KH
79
141
TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL
ENSPTRP00000048786
KH
164
228
IQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMV
ENSPTRP00000048786
KH
255
314
SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPEYYRQQVAFYGQTLGQA
ENSPTRP00000048787
KH
19
81
TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL
ENSPTRP00000048787
KH
104
168
IQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREMV
ENSPTRP00000048787
KH
195
255
SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPEYYRQQVAFYGQTLGQAQ
Links
Other
KH
family RBPs
Other
Pan troglodytes
RBPs
82 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCLIV_053370
Neospora caninum
NCLIV_053370
N
0.000
TGGT1_055960
Toxoplasma gondii
TGGT1_055960
N
0.000
TGVEG_093020
Toxoplasma gondii
TGVEG_093020
N
0.000