ATRBP37 (Arabidopsis thaliana)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AT4G10610-TAIR-G T32775_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT4G10610.1-P RRM 152 219
AT4G10610.1-P RRM 249 317
AT4G10610.2-P RRM 152 219
AT4G10610.2-P RRM 249 317

Links

Other RRM family RBPs
Other Arabidopsis thaliana RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.745
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.891
XM_002874153.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001957 N 0.701
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.745
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.978
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.788
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.891
CID13 Arabidopsis thaliana AT5G24440-TAIR-G N 0.701
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.788
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.737
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.745
BRADI1G39150 Brachypodium distachyon BRADI1G39150 N 0.723
BRADI2G06650 Brachypodium distachyon BRADI2G06650 N 0.745
BRADI3G09250 Brachypodium distachyon BRADI3G09250 N 0.730
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.839
PK04894.1 Cannabis sativa PK04894.1 N 0.832
PK28889.1 Cannabis sativa PK28889.1 N 0.745
PK12463.1 Cannabis sativa PK12463.1 N 0.898
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.825
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.832
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.832
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.818
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.759
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.752
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.818
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.715
MDP0000233630 Malus x domestica MDP0000233630 N 0.839
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.839
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.839
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.839
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.839
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.839
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.839
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.839
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.898
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.752
cassava45236.m1 Manihot esculenta cassava45236.m1 N 0.730
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.832
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.796
mgf005336m Mimulus guttatus mgf005336m N 0.708
mgf012896m Mimulus guttatus mgf012896m N 0.839
mgf013366m Mimulus guttatus mgf013366m N 0.825
mgf014445m Mimulus guttatus mgf014445m N 0.708
BGIOSIBCE006292 Oryza indica BGIOSIBCE006292 N 0.723
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.854
LOC_Os06g35030 Oryza sativa LOC_Os06g35030 N 0.708
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.854
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.766
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.723
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.737
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.839
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.839
POPTR_0012s02890 Populus trichocarpa POPTR_0012s02890 N 0.708
B9GIT2_POPTR Populus trichocarpa POPTR_0001s45290 N 0.752
B9IDI5_POPTR Populus trichocarpa POPTR_0015s00770 N 0.708
ppa006808m Prunus persica ppa006808m N 0.832
ppa009298m Prunus persica ppa009298m N 0.752
30068.m002593 Ricinus communis 30068.m002593 N 0.883
29485.m000140 Ricinus communis 29485.m000140 N 0.839
29650.m000268 Ricinus communis 29650.m000268 N 0.737
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.832
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.832
SB03G002180 Sorghum bicolor Sb03g002180 N 0.730
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.723
SB07G001560 Sorghum bicolor Sb07g001560 N 0.854
SB10G021290 Sorghum bicolor Sb10g021290 N 0.730
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.745
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.854
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.847
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.854
GRMZM2G349794 Zea mays GRMZM2G349794 N 0.766
GRMZM2G069816 Zea mays GRMZM2G069816 N 0.723
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.861
GRMZM2G051043 Zea mays GRMZM2G051043 N 0.730
GRMZM2G118590 Zea mays GRMZM2G118590 N 0.715