DDB_G0286297 (Dictyostelium discoideum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 DDB_G0286297 T34550_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
DDB0233775 RRM 18 85

Links

Other RRM family RBPs
Other Dictyostelium discoideum RBPs

106 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s10565g5t1 Acyrtosiphon pisum DGIL_AUG5s10565g5t1 N 0.750
AAEL005909 Aedes aegypti AAEL005909 N 0.779
Ame_R001592 Ailuropoda melanoleuca Ame_R001592 N 0.735
Aqu1.214150 Amphimedon queenslandica Aqu1.214150 N 0.750
ENSACAG00000011677 Anolis carolinensis ENSACAG00000011677 N 0.735
AGAP002780 Anopheles gambiae AGAP002780 N 0.765
amel4_ncbi_hmm5835 Apis mellifera amel4_ncbi_hmm5835 N 0.765
XM_002873508.1 Arabidopsis lyrata scaffold_601250.1 N 0.000
AT5G12190 Arabidopsis thaliana AT5G12190-TAIR-G N 0.000
32497 Aureococcus anophagefferens 32497 N 0.000
EDO06533.1 Babesia bovis EDO06533.1 N 0.000
GP3.080340 Batrachochytrium dendrobatidis GP3.080340 N 0.000
Q2KIQ7_BOVIN Bos taurus ENSBTAG00000003407 N 0.735
BRADI1G04240 Brachypodium distachyon BRADI1G04240 N 0.721
estExt_GenewiseH_1.C_6800062 Branchiostoma floridae estExt_GenewiseH_1.C_6800062 N 0.765
CBN08400 Caenorhabditis brenneri CBN08400 N 0.765
CBG06987 Caenorhabditis briggsae CBG06987 N 0.765
C50D2.5 Caenorhabditis elegans C50D2.5 N 0.765
CJA01433 Caenorhabditis japonica CJA01433 N 0.750
CRE22109 Caenorhabditis remanei CRE22109 N 0.765
LOC100386467 Callithrix jacchus ENSCJAG00000007716 N 0.735
XM_532889.2 Canis familiaris ENSCAFG00000003957 N 0.735
PK21780.1 Cannabis sativa PK21780.1 N 0.706
estExt_fgenesh1_pg.C_2760028 Capitella teleta estExt_fgenesh1_pg.C_2760028 N 0.735
ENSCPOG00000008016 Cavia porcellus ENSCPOG00000008016 N 0.735
estExt_GenewiseW_1.C_340090 Chlamydomonas reinhardtii estExt_GenewiseW_1.C_340090 N 0.000
estExt_Genewise1Plus.C_10695 Chlorella NC64A estExt_Genewise1Plus.C_10695 N 0.000
estExt_fgeneshCV_pm.C_140033 Chlorella vulgaris estExt_fgeneshCV_pm.C_140033 N 0.000
ENSCHOG00000000689 Choloepus hoffmanni ENSCHOG00000000689 N 0.735
ENSCHOG00000013886 Choloepus hoffmanni ENSCHOG00000013886 N 0.000
ENSCING00000012689 Ciona intestinalis ENSCING00000012689 N 0.765
ENSCSAVG00000008970 Ciona savignyi ENSCSAVG00000008970 N 0.750
estExt_Genemark1.C_140122 Coccomyxa C 169 estExt_Genemark1.C_140122 N 0.000
Cucsa.086930 Cucumis sativus Cucsa.086930 N 0.000
CpipJ_CPIJ008576 Culex pipiens CpipJ_CPIJ008576 N 0.779
CPIJ008576 Culex quinquefasciatus CPIJ008576 N 0.779
sf3b14 Danio rerio ENSDARG00000009753 N 0.735
estExt_fgenesh1_kg.C_20004 Daphnia pulex estExt_fgenesh1_kg.C_20004 N 0.783
ENSDNOG00000007148 Dasypus novemcinctus ENSDNOG00000007148 N 0.735
0610009D07Rik Dipodomys ordii ENSDORG00000009772 N 0.735
GF10910 Drosophila ananassae FBgn0087950 N 0.754
GG14070 Drosophila erecta FBgn0106332 N 0.754
GH16287 Drosophila grimshawi FBgn0123758 N 0.754
GI13232 Drosophila mojavensis FBgn0135989 N 0.754
GL22529 Drosophila persimilis FBgn0160121 N 0.754
GA12181-RA Drosophila pseudoobscura FBgn0072229 N 0.754
GM13852 Drosophila sechellia FBgn0168783 N 0.754
GD13137 Drosophila simulans FBgn0184859 N 0.754
GJ12004 Drosophila virilis FBgn0199256 N 0.754
GK17258 Drosophila willistoni FBgn0219257 N 0.754
GE20495 Drosophila yakuba FBgn0068445 N 0.754
e_gw1.13.49.1 Emiliania huxleyi e_gw1.13.49.1 N 0.710
LOC100056247 Equus caballus ENSECAG00000015618 N 0.735
ENSFCAG00000004304 Felis catus ENSFCAG00000004304 N 0.735
SF3B14 Gallus gallus ENSGALG00000016501 N 0.735
ENSGACG00000004803 Gasterosteus aculeatus ENSGACG00000004803 N 0.735
Glyma02g44710.1 Glycine max Glyma02g44710.1 N 0.000
Glyma14g04020.1 Glycine max Glyma14g04020.1 N 0.000
68671 Helobdella robusta 68671 N 0.765
AC008073.5 Homo sapiens ENSG00000115128 N 0.735
XP_002160322.1 Hydra magnipapillata XP_002160322.1 N 0.750
ISCW024082 Ixodes scapularis ISCW024082 N 0.794
LOAG_04189 Loa loa LOAG_04189 N 0.783
estExt_fgenesh2_kg.C_sca_670005 Lottia gigantea estExt_fgenesh2_kg.C_sca_670005 N 0.765
chr2.CM0308.280.nc Lotus japonicus chr2.CM0308.280.nc N 0.000
ENSLAFG00000029423 Loxodonta africana ENSLAFG00000029423 N 0.735
XM_001098393.1 Macaca mulatta ENSMMUG00000001282 N 0.735
MDP0000185506 Malus x domestica MDP0000185506 N 0.706
MDP0000916880 Malus x domestica MDP0000916880 N 0.000
cassava30358.valid.m1 Manihot esculenta cassava30358.valid.m1 N 0.706
Medtr5g096400 Medicago truncatula Medtr5g096400 N 0.000
ENSMGAG00000014057 Meleagris gallopavo ENSMGAG00000014057 N 0.735
Minc01156 Meloidogyne incognita Minc01156 N 0.750
estExt_Genewise1Plus.C_10491 Micromonas pusilla estExt_Genewise1Plus.C_10491 N 0.000
mgf016428m Mimulus guttatus mgf016428m N 0.000
XM_001364269.1 Monodelphis domestica ENSMODG00000002144 N 0.706
fgeneshMC_pg.3_#_621 Mucor circinelloides fgeneshMC_pg.3_#_621 N 0.000
0610009D07Rik Mus musculus ENSMUSG00000037361 N 0.735
ENSMLUG00000002473 Myotis lucifugus ENSMLUG00000002473 N 0.735
nasonia_NCBI_hmm146063 Nasonia vitripennis nasonia_NCBI_hmm146063 N 0.765
nasonia_NCBI_hmm648054 Nasonia vitripennis nasonia_NCBI_hmm648054 N 0.765
estExt_fgenesh1_pg.C_1580052 Nematostella vectensis estExt_fgenesh1_pg.C_1580052 N 0.735
NCLIV_001260 Neospora caninum NCLIV_001260 N 0.000
SNAPOd2T00023714001 Oikopleura dioica SNAPOd2T00023714001 N 0.000
ENSOANG00000007627 Ornithorhynchus anatinus ENSOANG00000007627 N 0.735
ENSOCUG00000022008 Oryctolagus cuniculus ENSOCUG00000022008 N 0.735
BGIOSIBCE013412 Oryza indica BGIOSIBCE013412 N 0.750
LOC_Os03g59710 Oryza sativa LOC_Os03g59710 N 0.750
ENSORLG00000015955 Oryzias latipes ENSORLG00000015955 N 0.721
XM_515324.2 Pan troglodytes ENSPTRG00000011709 N 0.735
GSPATP00004048001 Paramecium tetraurelia GSPATP00004048001 N 0.000
GSPATP00010032001 Paramecium tetraurelia GSPATP00010032001 N 0.000
PHUM617060 Pediculus humanus PHUM617060 N 0.765
PHATR_8132 Phaeodactylum tricornutum Phatr8132 N 0.000
estExt_fgeneshPB_pg.C_50297 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_50297 N 0.000
estExt_Genewise1.C_630098 Physcomitrella patens estExt_Genewise1.C_630098 N 0.721
estExt_fgenesh1_pg.C_130126 Phytophthora capsici estExt_fgenesh1_pg.C_130126 N 0.739
PITG_10282 Phytophthora infestans PITG_10282 N 0.739
fgenesh1_pm.C_scaffold_108000003 Phytophthora ramorum fgenesh1_pm.C_scaffold_108000003 N 0.710
s_454910 Phytophthora sojae s_454910 N 0.739
PBANKA_143980 Plasmodium berghei PBANKA_143980 N 0.000
PCHAS_144180 Plasmodium chabaudi PCHAS_144180 N 0.000
PFL1200c Plasmodium falciparum PFL1200c N 0.000
PKH_144160 Plasmodium knowlesi PKH_144160 N 0.000
PVX_123875 Plasmodium vivax PVX_123875 N 0.000
PY07239 Plasmodium yoelii PY07239 N 0.000
ENSPPYG00000012603 Pongo pygmaeus ENSPPYG00000012603 N 0.735
B9GG60_POPTR Populus trichocarpa POPTR_0001s28000 N 0.706
B9HNI9_POPTR Populus trichocarpa POPTR_0009s07180 N 0.000
PPA24922 Pristionchus pacificus PPA24922 N 0.750
ppa013407m Prunus persica ppa013407m N 0.706
ppa013405m Prunus persica ppa013405m N 0.706
ENSPVAG00000011346 Pteropus vampyrus ENSPVAG00000011346 N 0.735
RO3G_04631 Rhizopus oryzae RO3G_04631 N 0.000
29868.m000351 Ricinus communis 29868.m000351 N 0.706
SPRG_00106 Saprolegnia parasitica SPRG_00106 N 0.735
Sjc_0071370 Schistosoma japonicum Sjc_0071370 N 0.750
Smp_032060 Schistosoma mansoni Smp_032060 N 0.750
estExt_fgenesh2_pg.C_240194 Selaginella moellendorfii estExt_fgenesh2_pg.C_240194 N 0.735
ENSSARG00000011902 Sorex araneus ENSSARG00000011902 N 0.735
SB01G003790 Sorghum bicolor Sb01g003790 N 0.735
ENSSSCG00000008587 Sus scrofa ENSSSCG00000008587 N 0.735
SF3B14 Taeniopygia guttata ENSTGUG00000013191 N 0.735
ENSTRUG00000006551 Takifugu rubripes ENSTRUG00000006551 N 0.750
ENSTSYG00000013978 Tarsius syrichta ENSTSYG00000013978 N 0.735
ENSTNIG00000009719 Tetraodon nigroviridis ENSTNIG00000009719 N 0.750
THAPSDRAFT_20086 Thalassiosira pseudonana Thaps20086 N 0.000
TA13725 Theileria annulata TA13725 N 0.000
TP02_0539 Theileria parva TP02_0539 N 0.000
TGGT1_042490 Toxoplasma gondii TGGT1_042490 N 0.000
TGME49_105010 Toxoplasma gondii TGME49_105010 N 0.000
TGVEG_106330 Toxoplasma gondii TGVEG_106330 N 0.000
amel4_ncbi_hmm5835 Tribolium castaneum amel4_ncbi_hmm5835 N 0.765
fgeneshTA2_pm.C_scaffold_21000029 Trichoplax adhaerens fgeneshTA2_pm.C_scaffold_21000029 N 0.768
ENSTBEG00000012532 Tupaia belangeri ENSTBEG00000012532 N 0.735
ENSTTRG00000013430 Tursiops truncatus ENSTTRG00000013430 N 0.735
ENSVPAG00000005546 Vicugna pacos ENSVPAG00000005546 N 0.735
GSVIVG00037329001 Vitis vinifera GSVIVG00037329001 N 0.706
e_gw1.17.197.1 Volvox carteri e_gw1.17.197.1 N 0.721
AAH57709 Xenopus laevis AAH57709 N 0.721
sf3b14 Xenopus tropicalis ENSXETG00000018204 N 0.735
GRMZM2G358416 Zea mays GRMZM2G358416 N 0.735
GRMZM2G107745 Zea mays GRMZM2G107745 N 0.735